Frankliniella occidentalis (western flower thrips): 113215529
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Entry
113215529 CDS
T07591
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113215529
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113215529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3730
Motif
Other DBs
NCBI-GeneID:
113215529
NCBI-ProteinID:
XP_026290944
UniProt:
A0A6J1TJE0
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MEIMAGSDEIETPNSRQTVDPVSVVKEINKLVTVIKRNDQKQKLNEINEMKQLRFLICDH
NPVRSVTACQGLMSLVEDDVLQPMHAISLLVSAFANIQNYSGVTAALAVLLRWDMDSRPK
PYECPFSLYPIQHPLITLLKHKRDTWSDVYRLVQNFFFHSEKRIEEENILVLRPLLLYVL
CDPQSTPHLPAESRQKTWALLLHFLEDLSVRQLVFQCVPWFQIADESRCVEAGMLLLDLC
ESALREHDGPLCMALAPIAAASIRNLVTRGADPEPCLAIVIRLLSVSSNGASCVMLLLAD
TITVCPATFLASIIKSCKEIFNLHACSRVSVYAVVTSLLPWLAFPSVLTRGALQLATKFL
VEIRDSPASCWSNTASSLCANPWFRLLRHSFENVHEAAELCRVNESWRSETEANKWIDLV
KTSCPTFIARFSPYFCSLLISNSFSDVKDEDDSVEWPALSSLVWLANNQASVSGRITLTL
LYQLAQEKRPLQQLALFRAISVMGKYEENMVLILGVLKSLMVGGFYSSTLALDLFVRVWK
VQPRAYRFLHDLLTTPFKGDNQDLLWESNIAKAAAINEICSTSPDAHGSELVPLLSQILT
QNASPEGSVASSLAVQGITSLCRAGIMDVASTWRGLAPKLMQDKRPGVIVSLCELLSVVS
CLSTTTGKYEEFIADVIVTLWSWAQHANSEVACAALKSLSEFHMDQITLKSLPAAFRQNL
KLPSAFCKTPIDAKRDPVEVLPYVPGDCWKQVLESLGSHEDRRAAVCSMLTSWMRNEIKL
FHRGLYNQSPSKPEPTSYEHLHDSSILRAMFSVAYQAKYSLKLSALALTVLAKDLPRPLP
PVTWNFIEEKLKEGGTVRKNCLEILAKQCKSSQSANRILLATLSSLSLPDDVEDCKTIFT
VLNYLGQGIPPNHLGPFVDRCLAHAVDEMKSEDTLLKTYLGHMKVALRSQDLHESNVATL
ANIIEKLVEKINLSDKVFDSFEECALVLPSKNVERLISPSLWWEVSLKKVLCAIRVSSAI
AMAQDSDMPLAALNDTIDICADGDLKAQECLLESVMRVVRVCRDHESNSRWLLQLLGRIQ
AIKANKDTENEKKSKMLLSVCDLLLVTVISLAGHDILAGDPKIIASSSQDRHLLFPQALW
ALLNTNSTWKNLSSQVIEWLYDMSIAAEVPSLLAQTFRLAITPLRYQQHFKKTTVWMRIL
SS
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcatggcaggatcagatgaaattgaaacaccgaattctcggcagaccgtcgat
cctgtttcagttgtcaaggaaatcaacaaattagttactgtaatcaaaagaaatgatcaa
aaacagaaattaaatgagattaatgaaatgaaacagctgcgtttccttatatgtgaccac
aatccagttcgctcagtaactgcgtgtcagggtcttatgtcattagttgaagatgatgtt
ctacaacccatgcatgctatttctctcctagtttcagcttttgccaatattcaaaactat
tctggagttactgcagccttagctgtattgttgcgctgggatatggacagccgtccaaaa
ccttatgaatgtcccttctctttgtacccaatacaacatccacttatcacacttcttaag
cataaaagagacacttggtcagatgtgtatcgccttgttcaaaattttttctttcattca
gaaaagagaattgaggaagaaaacattttggttttaaggcctcttcttctgtacgtcttg
tgtgatccacaaagtactccgcatttgccagcagaaagccgtcagaagacatgggcatta
ctgttacattttcttgaagacttgtctgtaaggcagctagtatttcaatgtgtgccctgg
ttccagattgctgatgaatcgcgatgtgttgaggcaggcatgcttctccttgacctatgt
gaatcagctctaagggaacatgatggacctctgtgtatggctttggccccaatagcagct
gcatcaatacgtaaccttgtgacccggggagctgatcctgagccttgcttggcaattgtg
atacgtctcctctcggtttcgtccaatggagctagctgtgtcatgcttctgttggctgac
accattactgtttgccctgcaactttccttgcttctataattaaatcttgtaaagaaata
ttcaaccttcatgcctgcagcagagtttcagtatatgctgttgttacttcattacttcca
tggttggctttcccatctgttctgactagaggagctcttcaactcgccactaaatttttg
gttgaaatacgtgactctccagccagctgctggagcaacactgccagctccttatgtgca
aatccttggttcagattattaagacattcatttgagaatgttcatgaagctgcagaactg
tgccgagtaaatgaatcatggcgcagtgagactgaagcaaacaagtggatagatcttgtg
aaaacatcttgtcctacatttattgctagattctcaccatatttttgttccctattaata
tcgaactcctttagtgatgtaaaggatgaagacgattctgttgagtggcctgccttgtca
agtttagtgtggttagccaataatcaagcaagtgttagtggtaggatcacactcactctt
ttgtaccagcttgctcaagaaaaaagaccattacaacagttagcacttttcagagcaata
tcagttatgggaaagtatgaggaaaatatggtacttattttaggggttctcaaatctttg
atggttgggggtttctattcttccacattggctttagatttgtttgtcagagtttggaaa
gtgcaaccaagagcatatcgttttctccatgacctcctcactacacccttcaaaggagac
aaccaggacctgctctgggaatcaaacattgcaaaagcggcagcaatcaatgaaatttgt
tccactagcccagatgctcatggctcagaattagtccccttgctatcacaaattttaact
caaaatgcatcccctgagggaagtgtggcctcatctttagctgtgcaaggaataaccagc
ctttgtagggcaggaatcatggatgtagcaagcacatggcgaggcttggcccctaaactt
atgcaggacaaacgtccaggcgtcattgtaagtttatgtgagctgttaagtgttgtttca
tgcctatcaactactacaggaaagtatgaagaatttattgccgatgttattgtcactttg
tggagctgggcccaacatgctaacagtgaagttgcctgtgcagcactcaagtccctttct
gagtttcacatggatcagattacattgaagtcactaccagctgcatttcgtcaaaaccta
aaacttccatcagcattttgcaaaacccctatagatgccaaacgagaccccgtagaggtc
ttgccatatgttcctggcgattgctggaaacaagttttagaaagcttaggctctcatgag
gacagaagggcagcagtctgctctatgttaacaagctggatgcgtaatgaaattaaacta
tttcaccggggattgtacaaccaatcaccctccaaacctgaaccaacatcttatgaacat
ctgcatgacagtagtatcttgagagcgatgttcagtgtggcataccaggccaaatatagt
ctcaaattgtccgctctggcattgactgttcttgccaaagacctacctaggcctcttcca
cctgtcacatggaactttatcgaggagaagctaaaggagggtggaacagtgagaaagaac
tgtctggaaatattagctaaacaatgtaaatcatctcaatctgcaaatcgcattctactc
gctacattatcttctctcagtctcccagatgatgtggaggattgtaagacaatctttact
gtgctcaattatctagggcaaggaataccgccaaatcatcttggtccctttgttgataga
tgtcttgcccatgcggttgatgagatgaaatctgaagacacacttttaaagacttatctg
gggcacatgaaagtggcacttcgctctcaagatttgcatgaaagcaatgtagcaacactt
gcaaatataatagaaaaacttgtggagaaaataaatttgtctgacaaagtttttgattcc
tttgaggaatgtgctttagtgctacccagtaagaatgttgaacgtctaatatcaccatct
ctctggtgggaggtttctcttaagaaagttttgtgtgctattcgtgtgagttctgcaatt
gcaatggcacaggattcagatatgccattggctgcactcaatgacacaattgatatttgt
gctgatggtgacttaaaagctcaagagtgcttgctggagtctgttatgcgagtagtgaga
gtttgtcgagaccatgagtcaaacagtcgttggttgctgcaattgctcggaaggattcag
gctattaaagcaaacaaggacactgagaatgagaaaaaatctaagatgcttctgtcagta
tgtgatcttctcctagtgactgtcataagccttgctggccatgatattctagctggtgat
ccaaaaattatagcttcaagcagtcaagatcgtcacctcctgtttcctcaagctctttgg
gctttacttaatacaaactcaacatggaaaaaccttagctctcaggtaattgagtggttg
tatgacatgagtatagcagctgaggtacctagtcttctagcacagacattccgactggcc
atcactcccctcaggtaccaacagcattttaaaaagactactgtatggatgcgtattttg
tcatcttaa
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