Frankliniella occidentalis (western flower thrips): 113216030
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Entry
113216030 CDS
T07591
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113216030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113216030
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113216030
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
113216030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113216030
NCBI-ProteinID:
XP_052121044
UniProt:
A0A9C6U0X3
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MVKSTSYLFFFISFGNFLSVYFIFQNDLRNDGRSKQDYRPIELELDIVTHANGSARVRLA
NTDILVGVKTEIDVPTSNRPEEGKIEFFVDCSANATPEFEGKGGQDLATEIGNYLGSSFA
SPLSFDLKPLCILKGVQCWKLYVDILILECGGNLFDAVSLAVKAALYNTMVPRVETVAMD
GGNVDLQLSGDPFDCWRLDITNIPCLVTLTKIGEHLIVDPTAEEEECSMASLVVAVTESG
RINSLCKTSVGSLHPQTLTDALKVGVEVGVGLNKALNEALGREEKRLQSNKPERFGFLK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtcaaccagctatttgtttttctttataagttttgggaacttcttatcagta
tacttcatttttcagaatgacctccggaatgatggtagatctaaacaagactaccgacca
attgagttggaacttgatatcgtgacacacgccaatggctcagcaagggtacggctagca
aacactgacattcttgtgggtgttaagacagaaattgatgtacccacatctaatcgccca
gaagaaggaaaaattgaattttttgttgactgttctgccaacgctacccctgaatttgaa
ggcaaaggtggtcaagacttggcaacagagataggcaactacttagggagttcttttgca
tctcctttatcatttgatctcaaaccattatgcatactaaaaggagtccagtgttggaaa
ctttatgtagatatcctgattctagagtgtggtggtaacttgtttgatgctgtatcactc
gcagtaaaagcggctttgtataataccatggttccacgagttgaaactgttgcaatggat
ggtggcaatgtggatcttcaactttcaggggatccatttgattgttggagacttgacatt
acaaatattccctgtttagtaactctgaccaagattggtgagcatttgatagttgatccc
actgctgaagaggaagaatgtagcatggcatcattggttgtagctgtgacagagagtggt
cggattaactcactatgtaaaacaagtgtgggtagtttacatccacaaactttaacggat
gcactgaaggttggtgtcgaggttggagtgggactcaacaaagctttaaatgaagcactg
ggcagggaggaaaaacggctacaatcaaacaaacctgaaagatttgggtttctgaagtag
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integrated database retrieval system
