Frankliniella occidentalis (western flower thrips): 113216033
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Entry
113216033 CDS
T07591
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03022
Basal transcription factors
foc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113216033
09124 Replication and repair
03420 Nucleotide excision repair
113216033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113216033
03400 DNA repair and recombination proteins [BR:
foc03400
]
113216033
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113216033
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113216033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
HRI2_3H
Motif
Other DBs
NCBI-GeneID:
113216033
NCBI-ProteinID:
XP_026291507
UniProt:
A0A6J1TFH9
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MSSSEDVLLQVNEVRYKKGDGTLYAMNERLAWILEGKDTVSVSHRYADIKTQKISPVGKP
KIQLQVVLNDGTTSTFHFVNKLGPEAQIKDRDVVKELLQQQLPRYQAPARPINKELEEKN
RLLSQNPSLLQLYKDLVITQVITADEFWVKHATKFMQKQKAQAQEIGVSGAFLADIKPQT
DGCNGLKYNLTPDIIESIFKTYPAVRTKYMEHVPIKLSETEFWTKFFQSHYFHRDRINAG
TKDLFTECAKLDDQELKQDINSGISDPLVDITGFEDTSLAEGYGITPDKPSSSGGNIVHQ
SMIKRFNQHSIMVLKACQEKEPTQSNGDGLQSNSGSTTSSDTSLKPPEEKRMRLIEKVTY
EDLDSTSTVQSAPPLRLNFGQVEGYLQGSTPQSAYSTEAYHSSQADPKLRRDEFRKELSL
WYTSHGGQSTLVRPAAAVSALGELTPGGELMKGFIAESQAQLVPSDLQLELRNLYISMCE
LLRHFYACFPPTNPQLEEKVVKMYEAINRFHATRLTPFEDRVRAEFSPIRHHLTSHLHQL
IAAAYRRFDTWKMRQKTGRPLSLNKM
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctctgaagacgttcttctacaggtcaatgaagtcagatacaaaaagggcgat
ggcactttatatgctatgaatgaacgtctggcttggatattggagggtaaagacacagtg
tctgtaagtcaccgatatgctgatataaaaactcagaaaatatcacctgttgggaaacca
aagatacaactccaggtggttttaaatgatggaaccacttctaccttccactttgtgaac
aaattaggtcctgaggctcagataaaagacagagatgtagtcaaagaattgttgcaacag
cagttgcctagatatcaagctccagctaggcctattaataaggaactagaagaaaaaaac
agattattgtctcaaaacccatctcttcttcaactttataaagacttggtaataacccaa
gtaataacagcagatgagttttgggtgaaacacgctacaaaatttatgcaaaagcagaaa
gcacaggcacaggaaattggtgtctcgggagcatttttagctgatattaaaccacaaact
gatggttgcaatggactgaaatacaatttgactcctgacattattgaatctatatttaaa
acttaccctgctgttagaactaaatatatggaacatgtcccaattaaactgagtgaaaca
gagttttggaccaaatttttccagtctcactattttcacagagatcgtatcaatgctgga
actaaagatctgttcacagaatgtgccaaactagatgaccaagaactgaagcaggatatt
aactcaggaattagtgatccactagtggatattactggttttgaagacacctcactagct
gagggttatggaataactccagataaaccttcatcatcaggaggaaatattgttcaccag
agtatgataaagcgattcaatcagcattccattatggttttgaaagcttgtcaggagaaa
gaaccaacgcaatcaaacggtgatggtctgcagagcaactctggctccacaacttcatct
gacacatctcttaaaccaccggaagaaaagagaatgaggttgattgaaaaagttacatat
gaagatctggattccacatcaactgttcagtcagctcctccactgagactcaactttggt
caggtggagggttatctgcaagggtctacacctcaatccgcatactccactgaagcatat
catagttcacaagcggatcccaaactccgcagggatgaatttaggaaagagctctctctt
tggtatactagccatggtggacagagcactttggtacgtcctgctgctgcagtcagtgca
ctaggagaactcactccaggtggggagctcatgaaaggcttcattgctgaatctcaagcc
caactggtaccctcagatctccagcttgagctccgaaatctttacataagtatgtgtgag
ttactgaggcacttctatgcctgctttcctcctacaaatcctcaactggaagaaaaggtt
gtgaaaatgtatgaagcaatcaaccgatttcatgccaccaggctcactccttttgaggat
agggtaagggcagaattttccccaatccgccatcaccttactagtcaccttcatcagctt
attgctgcagcatacagaaggtttgatacttggaagatgcggcaaaagactggtagacct
ttaagcttaaataaaatgtaa
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