Frankliniella occidentalis (western flower thrips): 113216608
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Entry
113216608 CDS
T07591
Name
(RefSeq) RNA polymerase-associated protein Rtf1 isoform X1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113216608
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
113216608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
113216608
NCBI-ProteinID:
XP_026292135
UniProt:
A0A6J1TKC7
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MSKRKIALDSDSNESDSSDSDVDRELLTSLKKKVKSDDSPNESSAPKKGKVFTDSDTSSG
SDGEWDAKGTSKKKKAKPAKRTGKRTMTRSSSSSSSDSESEDDRNTKSKTSEPEEGEVSD
SGSDSDDSVSSQEEFNDGYDENLMGDEEDQARLAQMTEKEREQEIYKRIEQREVMKTRFE
IEKKLRLARKQEMKKKKDHDKKKELKMDPKERSKERKKTVEENRGRTENKKAAAMDMLKK
RREEKLKREESERQKRVDDEKKKEEEKGRGSDDDREDRDGDDSDGKSAGGGSSRTKLKAS
DIYSDDSGSESDKSDKGSRRGRRSSSSGSSSSGSGSDSDKRSVSSSKSKTKKVQFITKKE
DITKIRLSRHKMERFVHLPFFNRVVEGCFVRIGIGNHNNMPVYRVAEISGVCETGKIYQL
GTTRTNKGLKLRHGAQERVFRLEFVSNQDFTDSEFSKWKETCALQAISLPTMDDIEKKLK
DIREAMIYEFKEEDIEKIVQEKSRFQNNTYNYAMKKTQLMKERDIAQARGDEEEAATIAQ
KLLELEERANELDKLRTSTISSISYINDRNRKKNVEEAEKAILAELKATKGMKVMDPFTR
RHTKPRMTFKAKDEPDVIEPQLADIPAIKEKLSDENDKEKDKDKNSKGKTAALMSKTEDL
FLAHDFDIRIDLDMPITTNPVSVTPKPVSTVKDTGPRRSLNLEDYKKKRGLI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagaaaaattgctttagattctgattcgaatgagagtgatagcagcgactcc
gatgttgatagagaacttttgactagcttgaagaagaaagtgaagagcgatgattccccc
aatgaaagttcagcacccaaaaaaggcaaagtatttaccgattctgacacatcatctggt
tcggacggagagtgggatgcgaaaggaacaagtaaaaaaaagaaagctaaaccagcaaaa
aggacaggaaaacgtaccatgacaagatcatcatcatcatcctcatctgattctgaaagt
gaagatgatcgaaatacaaaaagtaaaacatccgaacctgaagaaggagaagtctctgac
agtggatcagactcagatgattctgtctccagtcaagaggaattcaatgatgggtatgat
gagaatttaatgggtgatgaagaagatcaagccagactggctcaaatgactgaaaaagag
agggagcaggaaatttataaacgtattgaacagcgtgaagtcatgaaaactagatttgag
attgaaaaaaagttgagactggcaagaaaacaggaaatgaaaaagaaaaaagatcatgac
aagaaaaaggagctgaaaatggatcctaaagaaaggagcaaagagagaaagaaaactgtt
gaagaaaatcgtggacggacagaaaacaaaaaagctgcagccatggacatgttgaaaaaa
cgccgtgaagagaaattgaaaagagaggagagtgagcggcaaaaaagagttgatgatgaa
aagaagaaagaggaagaaaaagggagaggtagtgatgatgacagggaagatagagatggt
gatgattctgatggtaaatctgctggtggaggtagttctcgcaccaagttaaaggcatct
gatatatacagtgatgacagtggatctgaaagtgataagagtgataagggaagcagaagg
ggaagacggtcaagtagtagtggcagtagcagtagtggctcaggttctgattcagacaaa
aggtcggtctcaagctctaaatccaaaacaaagaaagtacagtttataacaaagaaagaa
gatataaccaaaattaggctctctcggcacaaaatggaaagatttgttcacttgcccttc
ttcaatcgagttgtagaaggatgtttcgtgagaataggtataggaaatcacaataacatg
ccagtttatagagtggctgaaattagtggtgtttgtgaaactggaaaaatttatcaacta
ggtacaactcgtactaataaaggactcaaactcagacatggagctcaagaaagagtgttt
aggcttgaatttgtttctaatcaagactttactgacagtgaatttagcaagtggaaagaa
acttgtgcgttacaagcgatttctttgccaacaatggatgacattgaaaagaaactgaaa
gatattcgggaggccatgatatatgagttcaaagaagaagatattgagaaaattgtgcag
gagaaaagcaggtttcagaacaatacttataattacgccatgaagaaaactcagctaatg
aaggaaagggatatagcacaagctaggggagatgaagaggaggctgccactattgctcag
aaacttctggagctggaagaaagggctaatgaacttgataaattgcggacatctactatt
tcaagtatatcttacatcaatgaccgtaaccgcaagaaaaatgttgaagaagccgaaaag
gctattttggctgaacttaaagctactaaaggaatgaaagtcatggatcccttcacaagg
cggcatacgaaacctcgcatgacattcaaggccaaagatgaaccagatgtcatagaacca
cagctagctgacattcctgctatcaaggaaaagttgtctgatgagaatgacaaggagaag
gacaaagataaaaattctaaaggaaagactgctgctcttatgtcgaagactgaggatcta
tttttagctcatgattttgatattcgaatagacttagatatgcctattactaccaatcca
gtaagtgttacacccaaacctgtgagtactgtcaaagatacagggccaagaagatcattg
aatttggaagactataagaagaagagaggtcttatttaa
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