Frankliniella occidentalis (western flower thrips): 113217271
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Entry
113217271 CDS
T07591
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foc03009
]
113217271
Enzymes [BR:
foc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113217271
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
Pre-60S particles
Helicases
113217271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Med19
AAA_22
DUF1059
Col_cuticle_N
Motif
Other DBs
NCBI-GeneID:
113217271
NCBI-ProteinID:
XP_026292873
UniProt:
A0A6J1THX9
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MTEKPAMSFHDMEIDDRILKAVAKEGWTEPTLIQERTIPLFLQGKDILIRARTGSGKTGA
FAIPTIQKILNSKLVATEQAVKALVLAPSKELCQQIATNFHQLTYKCSRDVRILDISPQV
DINVQRPLLISKPDIVVSTPARALLHLQARSLLLKDSLEILVIDEADLIFSHGYESELKE
LLGFLPPVYQAVLASATLSDDVLQLKKLVLHNAVILKLEEPSLAPASQLQHYHLSAQEDD
KAAILYALIKLHLIRGKTIIFVNNVDRCYKLKLFLEQFGVPTVVLNSELPAVTRCHSVNQ
FNQGIYDIIIASDEATLDEPEEAGPSKKKKKKTDEQDEKQRSKRKKDKESGVSRGIDFQF
VSNVINYDFPPDINSYVHRVGRTARGKNKGTALSFVSLREQPLLEKVEEHLNDEHGQEKV
LKAYQFKLEEVEAFRYRARDAWRAVTRIAVREARLKEIRQEIFNSNALKSYFDDNPRDFS
SLRHDKALHTVKLQSHLADVPEYIVPDALKRLAGISSTSRKRRAYYNKNSSQEHFNAKKK
NPLLSLEFEKFGKGKK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaaacctgcaatgagttttcacgacatggaaattgatgatagaattttaaag
gctgtggcaaaagaaggttggacagaaccaacacttattcaagagcgaacaattccgcta
ttcctccaagggaaagatattctgattcgtgctcgtactggttcaggaaagactggtgca
tttgccattcctactattcagaaaatattaaactcaaaattggttgctactgagcaagca
gtcaaggccctggtacttgctccttctaaagaattatgtcagcaaattgcaacaaatttt
catcagctaacttacaaatgttctagggatgttcgtattttagatatttctcctcaggta
gacatcaatgtccagcgacccttgctcataagcaagccagatattgttgtttctactcca
gcacgggcacttcttcatttacaagcgagaagcttacttcttaaagatagtttggaaatt
cttgtaattgatgaggcagatttaattttttcacatggatatgaatccgaactcaaggaa
ttacttgggtttttgccccctgtttaccaagccgttttggccagtgccactttgtcagat
gatgtgttgcagctgaagaagctggttcttcacaatgctgtgatcctgaaactagaggaa
ccatctctagcacctgcctctcaacttcagcactatcatttatctgcccaagaggatgac
aaagctgctattctgtatgcgctcatcaaactgcatttaatccggggcaaaacgattata
tttgtcaacaatgttgaccggtgttacaagctaaagctatttttagagcagtttggtgtc
ccgactgtagtgcttaactcagaactgcctgctgttactcgatgccactcagtgaatcag
tttaatcaaggaatatatgacattattattgcatctgatgaagcaacacttgatgaacca
gaagaggctggaccatctaaaaaaaaaaagaagaaaactgatgaacaggatgagaaacaa
agaagcaaacgaaagaaagataaagaatctggagtttctcgaggcattgacttccaattt
gtttctaatgtgataaattatgatttccctccagacataaattcttatgtccatagagtg
ggacggacagctcgtggcaagaacaagggcactgctttgtcatttgtaagtttacgagaa
cagcctctgttggaaaaagtcgaagaacatttaaatgatgagcatggccaggagaaagta
ctgaaagcctatcaattcaagttggaggaagtggaggcctttaggtacagagctagagat
gcttggagagctgtcacaagaattgctgttagagaagcacggctcaaggaaataagacaa
gaaatatttaactcgaatgccctcaagagttattttgatgacaatcctagggacttcagc
tctctgcggcatgataaagcattgcacactgttaaactccagtctcatttagcagatgtg
cctgagtatattgtaccagatgctttaaaaagacttgctggtattagcagtactagccga
aaacgtcgtgcatattacaacaaaaactcatctcaggaacatttcaatgctaagaagaaa
aacccactgctaagtttggaatttgaaaagtttggaaaagggaaaaagtga
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