Frankliniella occidentalis (western flower thrips): 113217443
Help
Entry
113217443 CDS
T07591
Name
(RefSeq) NPC intracellular cholesterol transporter 1-like
KO
K12385
Niemann-Pick C1 protein
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
foc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
113217443
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113217443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
foc02000
]
113217443
Transporters [BR:
foc02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
113217443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
NPC1_MLD
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
113217443
NCBI-ProteinID:
XP_026293130
UniProt:
A0A6J1TNC2
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MTPASLAVVLAITCVALPHGLPVAEAAEQQCIWYGECNTDEKGFKQNCVDSQGPRKLTDA
AALETLRSDCPNLFNEQGEAITCCDADQIATMHASLLKAAAIYSRCPACFRNFYSIFCET
TCSPTQSEFLEVVESKTSDKGKYITEINAYLTADTMQNAYDSCKGVVMPQSGKYATDITC
GAYNSATCNSSRWFDFVGKGNPLSPFTINFLSNRGIFDDMNNREIKTLRCNETSEAATQP
CSCVDCELSCPVSSDDMFKPRNPFLITVLGVDVYVLAMVIAYIVILIVTAVCVRKKIVKK
RSGVERGILDNNPSVGSSANVSSNGTIDVSSDAETPSWRERTGFKFETSLERVFTGIGCG
CARNPVLVFFIASWVLAGCLVAISKLDIITKPVDLWASPTSQTRKDKDFFDSHFGPFFRA
EQIFVKAVGLPEVPHEMPQGTVNFGPVFSEEFLLKVWELQSAIQDLGRAEGHPLEEVCFA
PLHNDFTGPVTVDKCTIQTVWGYFQNSMEKFNKTGVKNGLKTNYLNVIYDCLQNSYDPSC
LAPYGGPAENLLVVGGFLNDDNKTMVQADALVLNFIVSNHVNDTDNAAAEEWEKRLVDLL
KHWEANEMPAWMDIAYMAERSIEDEIQRVSYTSFGIIALSYFLMIVYVSLSLGRFTTWRR
LLIDSKVFVAVSGVLSVLASLAAALGIFAHMNYPTILLTIEAVPFLVLAVGVDNLFILVA
THERLLSASKEAQPRPCPERIGRTLGESGPAMLLSTLAEGSCFLIGASSSMPAVRSFALL
AALSLAINFVMQCTVLMAVLALDEHRMLCNRLDLFCCCSVRSASRMKREQARGSRLVERL
FEHVLAPALMNRWVRVAVPVFFVCLFIGTLPCLPRVDVGLDQSLAMTKDSYVYKYFENMK
ELLSIGPPVYFVITQGLNYTDPAHQNLVCGGIGCSADSLATAVQSASKSAAISHIARPAS
SWLDDAFDWATLENCCKEFASNGSFCPHNREAPECTSCSVSVDKSTNRPSAADLRKYIPG
FLTDIPDENCAKGGLAAYSQGVNYVLDEYGQADVGASYFMGYHTPVRTSADYYEALRAAR
KISAKVEKAINSQLELAEPVRVFPYSIFYVYYEQYLTILWDTASSLIYSWVVLALVMTLL
NGLDMRASAIVSAIVLAIVMEMLALMTVWGIPLNAVSAVNLVVAMGIAVEFNSHIMHAFQ
QSVKGDRTARAKEALVETGSSVFSGIFLTKFCGIVVLAFAPIQMLEVFYFRMYLGMVLIS
AIHGLILLPVLLSYIGPKVNQARVNHHVEESRQLALLISESNT
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgcgagcctcgccgtcgtcctcgccatcacctgcgtcgcccttccgcacggc
ctgccggtcgcggaggcggcggagcagcaatgcatctggtacggcgagtgcaacacggac
gagaagggcttcaagcagaactgcgtcgactcccagggcccgaggaagctgacggacgcg
gccgccctggagacgctgcgctccgactgccccaacctcttcaacgagcagggtgaggcc
atcacttgctgcgatgccgaccagatcgcgacgatgcacgccagcttgctgaaggcggct
gccatctacagcaggtgtccggcgtgcttccggaacttctactccatcttctgcgagacg
acgtgctcgccgacgcagtcagagttcctggaggtcgtcgagtccaagaccagcgacaag
gggaagtacattacggagatcaatgcctacctgacggcggacacgatgcagaacgcgtac
gactcgtgcaagggcgtcgtcatgccccagagcggcaagtacgccacggacatcacctgc
ggggcctacaactccgcgacatgcaactcctctaggtggtttgatttcgttggcaaggga
aatccgctgtcaccgttcaccatcaacttcctcagcaaccggggtatttttgacgacatg
aacaacagagagatcaaaacgctgcgctgcaacgaaacatccgaagcggcgacccagccg
tgctcctgtgtcgactgcgaactgagctgcccggtctcgagcgacgacatgttcaagccc
aggaaccccttcctcatcacggtcttgggcgtcgacgtgtacgtgctggcgatggtgatc
gcgtacatcgtgatcctgatcgtgacggcggtctgcgttcggaaaaagatcgtgaaaaag
aggagcggcgtcgaaagaggaatcctggacaacaatccttcggtggggtcctctgctaac
gtttcgagcaacggcaccatcgacgtgagctcagacgcggaaaccccaagctggcgggag
agaactggcttcaagttcgagacttccctggaaagggtctttacgggtatcgggtgtgga
tgtgccagaaatccggtactcgtctttttcattgcgtcctgggtgttggcgggttgcctc
gtggccatctccaagctggacataatcacgaagcctgtcgacctgtgggcctccccaacg
tcacagaccaggaaggacaaggacttcttcgactcacactttgggccattctttcgagcc
gaacagattttcgtgaaggcggttggcctaccggaggtgcctcatgagatgccccaggga
actgtgaatttcggcccagtttttagcgaggagtttttgcttaaagtctgggagctccag
agtgccattcaagacctgggacgggccgagggccacccgctggaggaggtgtgcttcgct
cctttacacaacgacttcacgggacccgtcacggtggacaagtgcaccatccagaccgtc
tggggctacttccaaaactcgatggagaaattcaacaagacgggcgtgaaaaacggcctg
aagaccaactacctcaacgttatctacgactgcttgcagaactcttacgacccgtcctgc
ctcgcaccttacggcgggccggccgagaaccttctggtcgtgggcggcttcctgaacgac
gacaacaagaccatggttcaggccgacgccctcgtcctcaactttatcgtgagcaaccac
gtcaacgatacggataatgcggccgccgaggagtgggagaaaagactggtggacctcctc
aagcactgggaggccaacgagatgccagcgtggatggacatcgcttacatggccgaacgc
tccatcgaggacgagatccagagggtgtcctacacgtccttcggcatcatcgcgctctca
tacttccttatgatcgtgtacgtgtccttgtcgctgggccgcttcaccacctggaggcgg
ctgctgatcgacagcaaggtgtttgtcgccgtgagcggcgtcctatcggtcctggcgtcc
ttggccgccgcgctgggcatcttcgcacacatgaactaccctaccattctgctgacgatt
gaggccgtgccgttcctggtcctggccgtgggcgtggacaacctgttcatcctggtggcg
acgcacgagcgcctgctgagcgcgagcaaggaggcccagccgcggccctgccccgagcgc
atcggccgcacgctgggcgagtcgggcccggccatgctgctgtccacgctggccgagggc
agctgcttcctcatcggcgcctcgtcgtccatgccggccgtcaggtcgttcgcgctgctc
gccgcgctctcgctcgccatcaacttcgtcatgcagtgcaccgtgctgatggccgtgctc
gccctggacgagcaccgcatgctctgcaaccgcctggacttgttctgctgctgcagcgtg
cgcagcgcgtcccggatgaagcgcgagcaggcccgcggcagccgcttggtcgagcgcctg
ttcgagcacgtgctcgcgcccgcgctcatgaaccgctgggtgcgcgtcgccgtgcccgtg
ttcttcgtgtgcctgttcataggcacgctgccgtgcctgccgcgcgtggacgtcggcctc
gaccagtcgctcgccatgaccaaggactcgtacgtctacaagtactttgagaatatgaag
gagctcctgtctattgggccaccggtgtacttcgtcatcacccagggacttaactacacc
gacccggcccaccagaacctcgtgtgcggaggcatcggctgtagtgcggactccctggcc
accgccgtccagtcggcatccaaatcggcagccatatctcacattgcacgacctgcttcc
tcttggttggatgacgcttttgattgggcgactctcgaaaactgttgcaaggaatttgcg
agcaacggctctttctgtccgcacaatcgggaagccccggagtgcactagctgctcggtc
tcggtcgacaagtccaccaaccggccgtcggcagccgacctgcggaagtacatcccgggc
ttcctcacggacatacccgacgagaactgcgccaaggggggcttggcggcgtacagccag
ggcgtcaactacgtgctggacgagtacgggcaggccgacgtcggcgcgtcctacttcatg
ggttaccacaccccggtgcgcacgtccgccgactactacgaggccctgcgcgcggccagg
aagatctcggccaaggtggagaaggccatcaactcccagctggagctcgcggagcccgtc
cgcgtgttcccgtacagcatcttctacgtgtactacgagcagtacctgaccattctctgg
gacacggccagttccctcatctactcatgggtcgtgctggcgctcgtcatgaccctcctg
aacgggctcgacatgagggcgtccgccatcgtcagcgccatcgtcctggccatcgtcatg
gagatgctggccctgatgaccgtgtggggcatcccgctcaacgccgtgtcggccgtcaac
ctggtcgtggccatgggcatcgccgtcgagttcaactcgcacatcatgcacgccttccaa
cagtccgtcaagggcgaccggacagccagagcgaaggaggcgctcgttgagacggggagc
tcggtattttcaggaatctttctaacgaagttttgcggtatcgtagtgcttgcttttgct
ccgatacaaatgctggaggtattctactttcgaatgtatctcggcatggttctcataagt
gccatccatggtttaattcttctcccagtccttcttagttacatcggtcctaaggtaaac
caggcccgagttaaccaccacgtcgaggaaagcaggcaattagctctcttaatttcagag
agcaatacgtag
DBGET
integrated database retrieval system
