Frankliniella occidentalis (western flower thrips): 113217630
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Entry
113217630 CDS
T07591
Name
(RefSeq) nuclear factor NF-kappa-B p110 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04620
Toll-like receptor signaling pathway
foc04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113217630
04624 Toll and Imd signaling pathway
113217630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
foc03000
]
113217630
Transcription factors [BR:
foc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
113217630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_5
Ank_4
Ank_3
ANK_LRRK2
D5_N
Motif
Other DBs
NCBI-GeneID:
113217630
NCBI-ProteinID:
XP_052119561
UniProt:
A0A9C6TN35
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All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MSTSEATQFYNNFSIEELYAPQAQTTQAWDQSSCNGATMFPTPSPSPTSHQTSPFSSSYS
EEGEMAYSEGEVKLRIIEQPVPMFRFRYRSEMNGAHGSLLGQSENPKRKTYPTVELVNYD
GEAIIRCSLYTATPPHIPHMHQLIAKPSNNREILDHEVTVSDRNGYRAEFRGLGIVHMAK
KNLTKELMRKKEKDLIEKLKRQKNLPHFGDERQQIALKEMLPQLEAAAKRDAETMDANKL
RLCFEAFERGPNGEMRELCERVFSDTIQNMKSAETGGLKICRIDKCAGSCNGGDEIYILV
EKVCKKNVKIRFFEDDEHGQEVWSDEGLFSENDVHHQYAIVFRTPPYKRTDIEKDVSVKV
ELVRPKDNARSDPVPFRYKPARRYGQKRPCPSFSSLESSSSFEAPKRSKAPVMISGDDPM
ISGEKAISWNLSSETLNDVMKDLSSEVHIDEDFANFILSSNLSSYSQALNESKDRGGCRV
EEDQNMLLLQSEHCDFSPNMSSPGCLETFGDLSIERNSDWQTDGPGSKQNKEKHVDVVVE
GVSSKNHLVKKTASSSEDEAVKVTSNLAKNAYDKLLKLMKSRHPSRLQDMKNIIRAEDQE
FGPLHAAVIHGQLKELSDLLSLVIKSNQLKLINTSNRRRQTPLMVAVEENRVDCLKLLCM
ARADINQADYEENTAFHIAVKNKNSECLQVLLSAKKSQDSSCKIDLNRRNEYGETALHIA
VMKKDMKCVTQLVAAGADLNVKTGTSGSTPLHIAVETNSSEIVRLLLSQENINVNEVNFS
IKTPADLIKPSQKTITSLFMKVILF
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcagaagcaacgcagttttacaataacttttcaattgaagagctttatgct
cctcaggctcaaacaactcaagcttgggatcagtcttcatgtaatggtgcaacaatgttt
cccactccaagcccatcaccaactagccatcaaacaagccctttttcatccagttattct
gaagaaggtgaaatggcatacagtgaaggggaagttaaactacgaatcattgagcagcca
gttcccatgtttaggtttcgttatagatctgaaatgaatggtgcccatggaagtttgctt
ggtcaaagcgaaaatccgaagagaaaaacttacccaactgttgaacttgtcaattatgac
ggggaagcgataatacgctgttcgctgtatacagctacaccaccacacattccacacatg
catcaacttattgctaaaccatccaacaacagagagatacttgaccatgaagtcactgtt
tctgatagaaatggttacagagcagaattcagaggattgggtatagttcacatggcaaaa
aaaaaccttaccaaggagctgatgaggaaaaaagaaaaagatctaattgagaaattgaaa
agacagaagaatttgccccactttggggatgaaagacagcaaattgccttgaaagaaatg
cttcctcagcttgaagcagcggccaaaagggatgcagaaacaatggatgctaataaatta
cgtctttgctttgaagcatttgaaagaggtccaaatggtgaaatgcgtgaattatgtgaa
agagtgttctctgatacaattcagaatatgaaaagtgctgaaaccggaggacttaaaatt
tgtcgaattgacaaatgtgctggctcttgtaatggtggtgatgaaatctacatacttgtg
gaaaaagtttgtaaaaaaaatgtaaaaatccgcttttttgaggatgatgagcatggacaa
gaagtgtggagtgatgaagggttgttcagtgaaaatgatgttcatcaccaatatgcaata
gtatttagaactccaccatataagagaacagacatagaaaaagatgtgtctgtcaaagtg
gaacttgtaagaccaaaggacaatgcaagaagcgaccctgttccatttcgttataagcct
gctcgacgatatggccagaagagaccatgtccttcattttcaagccttgagagtagcagt
agttttgaggctccgaaaagatccaaagccccagtcatgatctcaggcgacgaccctatg
attagcggtgaaaaggccatcagttggaatttatccagtgaaacattaaacgatgtcatg
aaagatttgtcatcagaagtccacattgatgaagattttgcaaacttcattttatcttct
aatttatcttcttattctcaggctttgaatgaatcaaaagataggggtggatgcagagtt
gaagaggatcagaatatgcttctgcttcagtcagaacactgtgacttttctcccaacatg
tcttcccctggttgtctagagacttttggtgatttgagtattgagagaaactctgattgg
caaacagatgggccaggatcaaaacagaacaaagaaaaacatgtagatgtagttgttgaa
ggcgtgtccagtaaaaaccatttggtgaagaaaactgcatcaagctctgaggatgaggca
gtaaaagttacatcaaatcttgctaaaaatgcttatgataaattattgaaacttatgaag
agtcggcaccctagtagattacaggatatgaaaaatattatcagagcagaggaccaagaa
tttgggccactccatgctgctgttattcatggccaattaaaggaattgagtgatctcctt
tctctagtgattaaaagcaatcaactaaaactcatcaataccagtaatcgcagaagacag
actcctttgatggtggcagttgaggaaaacagagtggattgtctaaaattgctttgtatg
gcaagagctgatatcaaccaggcagattacgaagaaaacactgctttccacattgcagtc
aaaaataaaaattcagaatgtctacaagtactgctttcagccaagaaatcacaggattcc
agttgcaaaattgatttaaacagaagaaatgaatatggagaaactgctcttcatattgca
gtcatgaaaaaagatatgaaatgtgttactcagcttgtagcagctggggcagatcttaat
gttaaaactggaacctctggatcaacaccgcttcatatagcagttgaaactaactcttca
gagatagttcggttgttattgagtcaagaaaatattaatgtgaatgaagttaatttcagc
atcaaaactcctgctgatttaataaagccaagtcaaaaaacaataacatcattattcatg
aaggtaattttgttt
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integrated database retrieval system
