Frankliniella occidentalis (western flower thrips): 113217669
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Entry
113217669 CDS
T07591
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
foc03041
]
113217669
03016 Transfer RNA biogenesis [BR:
foc03016
]
113217669
Enzymes [BR:
foc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113217669
Spliceosome [BR:
foc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113217669
Transfer RNA biogenesis [BR:
foc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
113217669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Motif
Other DBs
NCBI-GeneID:
113217669
NCBI-ProteinID:
XP_026293438
UniProt:
A0A6J1TJG5
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MTAFEEMGVLPEIGKAVEEMDWMLPTDVQSEAIPLILGGGDVLMAAETGSGKTGAFCLPI
IQITWEALKDIESGKCGKGGGGAAASALSTPWTLSFWDRDSSMAVTPDGLRCQSRAPNWQ
GCRAIKAVQGSGKYYFESTVTDEGLCRVGWSTGQAVLDLGTDSWGYGFGGTGKKSNSKNF
DSYGESFGINDTIGCYLDLDSGEISFSKNEKHLGKAFVLSDNMKNKAFHPAVVLKNAEMA
FNFGATPFKFPPQGGFIALSQASKDCIRNPDAAPVKVVKDAPQAIIIEPSKELADQTFSQ
LNLFMKFLDKPKVRAALVTGGVSVNENIASLTKGVDIVVGTPGRMESLISSGNLILKACR
FFVLDEADGLLKQGYSGLIDSLHRQIPKVTADGNRLQMIVCSATLHDFDVKKMADRLMHF
PTWVDLKGEDAVPDTVHHVVVNVDPQKDRSWETLRKHIMTDDVHVRDNVRPGNNTAETLS
EAVKMLKGEYCIRAINEHKMDKALIFCRTKLDCDNLEKYFNQLGGGPRNPSNPYSCVCLH
GDRKPQERKENLDQFKQGRVKFLICTDVAARGIDISGLPFMINVTLPDEKSNYVHRIGRV
GRAERMGLAISLVSSLPEKVWFHGEWCPSRGRNCSNTRLTSEGGCCIWYNEPQYLADIEE
HLGVTIQQVGPDVKVPVDQFDGKVVYGQKRLNKGSSYENHVSQMAPAVQDLAQLESKAQL
LYLKRHYSKAFA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgacagctttcgaggaaatgggcgttttgcctgaaattggcaaagctgtagaggagatg
gattggatgttgccaactgatgttcaatcagaagccataccattaattcttggtggtggt
gatgttctaatggctgcagaaactggtagtggaaagacaggtgctttttgcctgcccatc
atccaaattacttgggaagctcttaaagatatagaaagtggtaaatgcggaaaaggtggt
gggggtgctgcagcttctgccttgtctaccccctggactttgagtttttgggaccgtgat
tcatcaatggcagttacacctgatggacttcgctgtcaatctcgcgctcccaactggcag
ggctgtagggccatcaaagctgttcagggctctggaaaatactatttcgagtcaactgta
actgatgaaggattgtgtagagttggctggagcactggacaggctgtacttgatcttgga
acagactcatggggctatgggtttggtggaacaggcaaaaaatccaacagcaaaaatttt
gactcatatggagaatcttttggaatcaatgatacgattggttgttatttagatttagac
agcggtgaaatttctttcagtaaaaatgagaagcatctaggcaaagcctttgtcctatca
gacaacatgaagaataaagctttccatcctgctgttgttttaaagaatgctgaaatggct
ttcaattttggtgctactcctttcaaatttccaccacaaggaggttttattgctttaagc
caagcatccaaagattgcatacgaaatcctgatgctgctcccgtgaaagttgttaaggat
gctcctcaagccatcattattgagccatcaaaagaattagcagatcagaccttcagccaa
ttaaacttgtttatgaagtttctggacaaaccaaaagtgcgcgctgctcttgtgactggc
ggagtcagtgttaatgaaaatattgcttctttgactaaaggagtggacattgttgtggga
acaccaggacgaatggagtctctgatatcttcgggaaatttaatcttgaaagcttgtcgt
ttttttgtacttgatgaagcagatggtctacttaagcaaggctatagtggtcttattgat
agtcttcacagacaaatccctaaagtcactgctgatggcaatagacttcaaatgattgtc
tgttcagctacacttcatgactttgatgtcaaaaaaatggctgaccgtctaatgcatttt
ccaacatgggttgacttgaaaggagaagatgctgtaccggacactgtccatcatgttgtt
gttaatgttgaccctcagaaggaccgctcatgggaaacattaaggaagcatattatgact
gatgatgttcatgtgagagacaatgtccgtcctggcaacaacacagcagaaaccctctct
gaagcagtaaaaatgttaaaaggagaatattgtattcgagccattaatgaacataaaatg
gataaggctcttatattttgccgaacaaaattagattgtgataatcttgaaaaatatttc
aatcagttgggtggtgggccaaggaacccctcaaacccctattcttgtgtgtgtctacat
ggagataggaagcctcaagagcgtaaggaaaatttagaccagtttaaacaaggaagagtg
aaatttctcatttgcactgatgttgctgctcgtggcattgacattagtggattgccattc
atgattaatgtaactcttcctgatgaaaagtcaaattatgttcaccgcattggccgtgtt
ggaagagctgagcgaatgggcctagcaatttctcttgtttcttctttacctgaaaaggtt
tggttccatggcgaatggtgtccatcaagaggacgcaattgttctaatacccgtttaacc
tctgaaggaggatgctgtatttggtacaatgaacctcagtatttggctgatatagaggaa
catcttggtgtaacgattcagcaagttggacctgatgttaaggtgcctgttgatcaattt
gacggcaaagttgtgtatggtcaaaagcgacttaataaaggaagttcttatgaaaatcat
gtgtctcaaatggctccggctgttcaagatttggctcaacttgaaagcaaagcacaatta
ctttatctcaagaggcattattctaaggctttcgcttaa
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