Frankliniella occidentalis (western flower thrips): 113217714
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Entry
113217714 CDS
T07591
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04140
Autophagy - animal
foc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113217714
04148 Efferocytosis
113217714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113217714
Membrane trafficking [BR:
foc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
113217714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
TPR_Vps41
Clathrin
DUF2175
TPR_12
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
113217714
NCBI-ProteinID:
XP_026293524
UniProt:
A0A6J1TJ33
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MYEAYECSQLLKLSVQIECIAAYDDNLLVGTKVGHLLMYSISSRYSDNKNEVHLLRYNRT
FSKKPIQQLAVVQEHQLLISLSDNIICVHDIAAINFPTICTVPETKGATLFSVDIKRTVT
QSGKTSVIVRMCVVVKRKLLLFYWKNGSFHPLMEELSMPDTPKALAWIKETICVGFKGDS
VYMLYHLNRDSKKDNSQTPLCPPGNRPPSVLEMNDEIFILGKDNSSIFVGTDGEAASLKQ
MKWESVPKDLVYDEPYIVALFPDSLEIRTVEPSLIVQMQKVKDPRIIIRCRSGLLYVASD
EHVWCLQNVTWSRQIHFLLEQKQFQLALKIANISDEPSEDKARNVHQIQTLYAYDLFNKK
QFKESMEQFLKLETDPTEVIKLFPNLLPQQARTRPAVDAVVQLADMDLESGLLALIEYLT
KVRLSKKAEKERKDKEQAERDTKRKLGKLTLVVEKEIDTESANHDKFSKATEQLFQIIDT
TLLKCYLQTNDAFVAPLIRLNHCHLGEAEKMLKKHEKNSELIILYQTKGLHKKALELLQK
QSTQQDPSLQGHYRTVLYLQNLGRDYIELIFQFAGWVLEQHPTDGLSIFIEDMPEVEGLP
RPKVLDFLLRLHKSLVIPYLEHVIHVWKDESTILHDALVHQYREQAATLLAGGKLAEGKV
VRAKLLSFLESSNNYSPENALVQFPYDSMFEERAVILGKLGKHEQVLSIYVMMLGNVSQA
IKYCHDVYRSEREGADEVYVLLIKMLISPPDSWLRGVPVSPATSKPDLETALSLLEEHAS
KIHPIQALEVLPDTVPICRIRHFLESSLQKQLNERRRILVLKSLTVAENLQVQEQRMHYE
SQSIKMTELNVCSVCKKRFGNQSAFALYPDGDVVHFSCQDRKAQQ
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaagcatacgagtgctcgcagttactaaaattaagtgtacaaatcgaatgtatt
gctgcttacgatgacaatcttctggtgggcacaaaagttgggcatttgctcatgtatagc
atatccagtcgttattctgataataaaaatgaagtgcatctgcttcgatacaacagaaca
tttagcaagaaacctattcaacaactggcggttgttcaagaacatcaacttcttatcagt
ttgtcagataatattatatgtgtccatgacatagcagctatcaatttccctacaatatgt
actgttcctgagaccaaaggtgccacactgttttcggtggatattaaaagaaccgttaca
cagtctggaaaaacgtcagttattgttcgcatgtgtgtggtagtaaaaagaaagttactt
cttttctactggaagaatggatcatttcatcctttaatggaagaactttcaatgcctgat
actcctaaagccttggcatggatcaaagaaacaatatgtgttggtttcaaaggcgacagt
gtatatatgttataccatctcaaccgagattcgaaaaaagataacagtcagacgccgctc
tgccctcctggaaatcgccctcccagtgttcttgaaatgaatgacgaaatttttatctta
gggaaagataattcttccatatttgttggtactgacggagaagctgccagtttgaagcaa
atgaagtgggaaagtgttccaaaagatttagtctacgatgagccttacattgtggcactt
tttccggactctcttgaaataagaacagtggagccatcacttattgtacaaatgcaaaaa
gtgaaggatccaaggattatcataagatgcagatctggattattgtatgttgcttctgat
gagcatgtctggtgtcttcaaaatgttacatggagcagacaaatccattttctgcttgaa
cagaaacagtttcaactggctctaaagattgcaaacatatctgatgaaccatcagaggac
aaagctagaaatgtccatcagattcagacattgtatgcctatgatttatttaataaaaag
cagttcaaagaatctatggagcaatttctcaagcttgaaactgatcccactgaagttatc
aaactttttcctaatttactgcctcaacaagcccgtacaaggcctgcagtagatgctgtt
gtccaattagctgatatggacttggaaagtggactacttgctttaatagaatatctaact
aaagtaagactcagcaagaaagctgaaaaggagagaaaagataaagaacaggcagaaagg
gacactaaaagaaagttggggaaattgactctagtagtagaaaaagaaatagacacagag
agtgcaaaccatgataagttcagcaaagcaacagaacaacttttccagataattgataca
actttgctcaaatgttacctccagacaaatgatgcatttgttgcaccacttatacggctg
aaccattgtcatttgggggaagctgaaaaaatgctcaagaaacatgaaaagaatagtgaa
ttaataattctgtaccagaccaaaggacttcataaaaaagctttagagctgctacaaaag
caatccactcaacaggatccttcattacaagggcactatcgaacagttttgtaccttcaa
aatctaggaagggattatatagaacttatctttcaatttgctggttgggttctagaacag
caccctacagatggactgagtatttttatagaagatatgccagaggtagaaggcttacct
cggccaaaagttcttgattttctcttgcgcctacataaaagtctagtcataccttatctt
gagcatgtgattcatgtatggaaggatgaatctactattttacatgatgccttggtgcat
caatacagagaacaggctgcaactctccttgctggtggtaaattggcagaaggaaaagtt
gtacgagccaaacttttatctttcttggaaagctcaaataattattctcctgaaaatgct
ttggttcaatttccatatgacagcatgtttgaagagagagctgtcatccttgggaagctt
gggaaacatgagcaagtattgtcaatatatgtaatgatgcttggcaatgtcagtcaggct
atcaagtactgccatgatgtgtaccgtagtgagagggagggtgcagatgaagtttatgtt
ttgcttattaaaatgttgataagtccaccggatagttggttaagaggagttcctgtatct
cctgccacttcaaagccagatctggaaacagctctcagtttattagaggagcatgcatca
aagatccatcctattcaggcattagaagtgttaccagatacagtaccaatatgtcgcatt
cgccattttcttgaatcaagccttcaaaagcaactaaatgaaagacggcgtatccttgtt
ctcaagagtttgacggttgctgaaaacctacaagtccaagaacaaagaatgcattatgaa
tctcaaagcataaagatgactgagttaaatgtctgttctgtgtgcaagaaacgatttgga
aatcagagtgcatttgctctttatccagacggagatgttgtccacttttcttgtcaagat
cgtaaagcacagcagtga
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