Frankliniella occidentalis (western flower thrips): 113217857
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Entry
113217857 CDS
T07591
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03013
Nucleocytoplasmic transport
foc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113217857
03015 mRNA surveillance pathway
113217857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113217857
03041 Spliceosome [BR:
foc03041
]
113217857
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113217857
Spliceosome [BR:
foc03041
]
Complex C
Other components
EJC/TREX
113217857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
113217857
NCBI-ProteinID:
XP_026293712
UniProt:
A0A6J1TLR1
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MATEVMKTFSALQEELQKAKEGLRNVDSNIKRIIGRDPEAQPPGQGPPRPGQKRPANQNE
EFYGRGRGSFQMGGGRGRGGPPGRQQDDEGPPGLRGRLGGRTGTVFSRLSGPPMKYIKKE
KDDDEYSGPPLKFYKREEEDDDVEDEDVQFTKPAISSRVIPQTRELPSKEDILAAQGDER
SKARNRRMFGALLGTLQRFRQEETRMRDKEDKRATVEKKLEEQAKQEKEEMKKERQELFH
DRRRKQQEIRRIEFKIQRVKEQDQWEAQHRPLLNFIQTKAKPSLFYLPKIQNTKTEERLV
ASQKLIAKMMEKKRATVQEELERFEGNAQIKTENSTEHQFEDKDEDMEAENGPSENIPGL
EDIPVDSPVENKENRLRSINVKVEKDKDAKVIEVEADGNKTDGEHSSDLHRQAPGMVNRW
YQRDSREHRDQRDHRDRSRDRQRREFQHDKERSKDKEMDRDRGRERERERERGRGRERER
VRERERRNDREDKVEVKKEDDEKWDRKRDRRNSSDTNALDDDDETFEEKKDSPANDAPEL
SSISLPGEQSSPLHHSQDEQDD
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaggtaatgaaaacttttagtgccctacaagaagagctgcagaaggctaaa
gaagggctaagaaatgtagacagtaatattaaacgcatcattggaagggacccggaagcc
cagcctccaggacaggggccaccaaggcctggccaaaagagacctgcaaatcaaaatgaa
gagttttatggccgaggtagaggatctttccaaatgggtggaggaaggggaagaggaggg
cctcctggaagacaacaggatgacgaagggccaccagggttacgcggtcggcttggaggt
agaactgggacagtgtttagcaggctgtcaggacctcccatgaaatatataaagaaagag
aaagatgatgacgaatactcagggccgcccttgaagttctataaaagagaggaggaagat
gatgatgtagaggatgaggatgtgcaatttaccaaacctgctattagctctagagtcata
cctcaaactcgagaacttccgtcgaaagaagatattctggcagctcagggggatgagcgc
agcaaggcaagaaatcgaagaatgtttggagctcttctgggaacacttcagaggtttaga
caagaagaaactagaatgagagacaaagaagataaaagagcaactgttgaaaagaaatta
gaagagcaagcaaaacaagaaaaagaagaaatgaagaaggaacgtcaagaactattccat
gacagacgtcgtaaacagcaagaaatacgccgcattgaatttaaaattcagcgagttaag
gaacaagatcaatgggaagctcagcacagaccattattaaactttattcaaactaaagca
aaaccatctttattttatctaccaaaaattcaaaatacgaagactgaagaaagacttgtt
gccagtcagaaactcattgctaaaatgatggaaaagaagcgagcaactgttcaggaagaa
ttggaacgctttgagggtaatgcacagattaagactgaaaactctactgaacatcaattt
gaagataaggatgaagatatggaagcagaaaatggcccttcagaaaatattcctggatta
gaagatatacctgtagacagtccagttgaaaacaaagaaaataggctgcgatcaataaat
gtcaaagttgaaaaagataaagatgctaaggtgattgaggtagaagcagatggaaacaaa
actgatggtgagcactcatctgatctccataggcaagctccaggtatggtaaatcgttgg
taccaacgggattcacgtgaacatagagatcagcgcgaccatcgtgatcgctccagagat
cgtcaacggcgtgaattccagcatgataaggaacgtagcaaagataaggaaatggatcgt
gatagaggcagggagcgggaaagggagagagagaggggccggggaagggaaagagagagg
gtgagagagagggaaaggagaaatgacagggaagataaagtggaggtgaagaaagaagat
gatgagaaatgggatagaaagagagacaggcgtaatagtagtgatacaaatgcgttggat
gatgatgatgaaacgtttgaagagaagaaagattcccctgccaatgatgcgcctgagctc
agttctatatctcttcctggtgagcaatcatctcctctgcaccattcacaagatgagcaa
gatgactga
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