Frankliniella occidentalis (western flower thrips): 113217968
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Entry
113217968 CDS
T07591
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foc03009
]
113217968
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
90S particles
Other 90S particles
113217968
Pre-60S particles
Other pre-60S particles
113217968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
INTS7_N
HEAT_GCN1_C_2
Ltn1_1st
VPS15-like_hel
Aip3p_Bud6_N
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
113217968
NCBI-ProteinID:
XP_026293865
UniProt:
A0A6J1TQP1
LinkDB
All DBs
Position
Unknown
AA seq
1356 aa
AA seq
DB search
MAKFRPRVKGKGKRWQKGHSSSSNPETKKFRDAARSRFFQENLVNDSKLTSDALRKHDAF
MGTKPEEIEVDEEESEVGGSVAGKSFKTFQTFASDWSSCSNVSFSNFLKRFTANSALHKE
MLAVLAAITEVIKSNGGTETSTEYFAALMTTLGVTESEDSLGAVLTLLGMGIKSVPQSVL
RKKFSEASKTFMDLLERFADSENQVIMRSVLGCLSVLMRSQEAAVWKNSSTVQVLDSILA
FTTHSKPKIRKAAQHAVCAILKSLCDSAKGEGHPAAPHVAKFCVRSLENSVGSVASQTTL
LHTLYLVKETIATFPKQNLKTLCETVLKVMTLNNVLVNSCGMQALHSLFAARPSATILPS
SLNAQLISALYDYQPPVSDAQPTLAWLAVMQEAHINLALQDLPMCCGHLPRLFTTVSQMW
LSDKADVLSNTTHTLSAVISDCLKLAAAPDVVERHTATLSKVFNVLQEGLKYQYHSAWKH
VIYLLGSFFEHCGATCENIILPCLTALGELQDSYQFACVHEVDHALGKAVTAMGPKAVLK
AIPLQVTGAEVNNQIKRSWLLPILRESIRNTELGFFIEYFLPLATISWRKSKELSSQGRK
AESVIYELFQAQTWSLLPSFCNHPTDIKDSFKNIAKVLGTVISDRKDLRLSVMSALRKLI
ICTQESEPSPKKEEDLKELARFAKNYVPILFNLYTTKANGSEEEGHRLAAYETIKVYLSI
ADSTLQNDLFERAFQKLKGEEVDKFIRESVMDLLRVLVPYQGPDNIAILYNLIKEGIAET
KNNRYQKKSYRLLEVLCSSPSDICIAFQNEHLQDVQKLLLKSLSSSATTSRGARLRCLIH
LVRRLPAKKANILKEIVPEAVLCVKDINERCRQSAFALLHELGLAMFRWKEEKLDNDDDE
EDMSERDHTVIKDFLALILAGLAGSPQMTSATLLALADVTHHFKSQFPDDLLQLLLENVC
LLATSPTREVAGSAISYLKQFVYSFPATTVGPYVPAIMKAFVTMTDDCKRHFRRETQHML
DRMMRKYGCDAIERQVPGDDEIMLKRVRNLRKLHARKQRVREERLKNKLAVEDSDDEEFS
VKARAKSIEEILAESDDELDLEKKESTSKGAKKKSQTWIKEEPGDIMDLADTMAASKISA
SKPSTSTANGMAFEKSSKKDKNRGFKTAPDGRLIIADNDNDSSDEEGKRKIKGSKRIPTV
SDSESDDDNDQDNDGDAMSSRSGPTVKGRKRKLSANTDARSTTTAGPSAKYQAGGSGIHR
PTSTAMSVKSGASGKTAATGKSSASNAFGSEYRSKKAKGDVKKKGAPDPYAYVPLNRALL
NKRKKLKQAGQFKGLVRAARKGAAAGRVAKTRVSRK
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatttagaccaagagttaaaggaaaggggaaaagatggcagaaaggtcatagt
tcgagctcaaatccagaaactaagaagtttcgagatgccgctagatcccgatttttccaa
gagaacttagtaaatgatagcaaacttacatccgatgctctacgcaaacatgatgcgttc
atgggaacaaaaccagaggaaattgaagtggatgaggaagagagtgaagtcggaggctca
gtggcaggaaagtcttttaagactttccaaacgtttgccagtgactggagctcatgttcg
aatgtttcattttccaatttcctgaaacgtttcacagctaattcagcattgcacaaggag
atgcttgctgttcttgctgcaatcacggaagttattaaaagcaatggtggtacagaaact
tcaacagagtattttgcagccctgatgactactctcggggttactgaatctgaggattca
ttaggtgctgttttaacattgctgggaatgggcatcaaaagtgtgccccaaagtgtcctc
cgaaaaaaattctctgaagcatccaaaacattcatggacctcttagagcgctttgctgat
tcagaaaaccaagttataatgcgatcagttttggggtgcctcagtgtactaatgcgtagt
caggaagcagctgtgtggaagaactcctcaactgttcaagtacttgattctatattagcc
ttcactactcactccaaaccaaagatccgcaaagctgcacagcatgcagtatgtgcaatt
ctgaagtccctctgtgattctgctaaaggagaaggtcaccctgcagcaccacatgttgca
aagttttgtgtccgatctcttgaaaattctgttggttcagtagcatctcaaacaactttg
cttcacacactctacctagtcaaagaaacaattgcaactttccctaagcaaaatctaaag
acactttgtgaaacagttttgaaagtcatgaccctgaacaatgtcttggtgaactcatgt
ggaatgcaagcattacattcactgtttgctgcacgaccatctgccactattttgccatct
tctctgaatgcacagctcatttcagcattgtacgattatcagccaccagtctctgatgct
cagccaaccctggcttggttggctgtaatgcaggaagctcacataaatttggcgctgcaa
gatttgccaatgtgttgtgggcatttacctcgactattcacaacggtgtctcagatgtgg
ctatctgacaaggctgatgttctcagtaacacaacacatacactttcagccgtcataagt
gactgtctcaaactggcagctgctcctgatgtcgttgagcgccataccgccactttatcc
aaggtttttaatgtccttcaggagggcctgaaataccagtaccacagcgcctggaaacat
gtcatttacctactgggatcattttttgagcactgtggtgcaacatgtgaaaatatcatc
cttccctgccttacagctttgggtgaattgcaagattcataccaatttgcctgtgtgcat
gaagttgatcatgcattggggaaggcagttacagctatgggacctaaagctgttctaaaa
gctattcctctgcaggttacgggagctgaagtgaataatcaaatcaaacgcagctggctc
ttacctatcttgagagaatctattcgcaacaccgaacttgggtttttcatagaatacttt
ttacctttagcaacaatcagctggaggaaaagtaaagaactttcttctcaaggaagaaag
gcagaatcagtgatttatgagcttttccaagctcaaacatggtccttgctgcctagcttt
tgcaatcatcccacagacatcaaggactccttcaaaaatattgccaaagttttgggtact
gtcattagtgaccgtaaagatttacgtctgtcagtgatgagtgctcttcgtaaactcatt
atttgcactcaagagtcagaaccatcacccaaaaaggaagaagatttaaaggaattagct
cgatttgctaaaaactacgtgcccattctctttaatctttatacaaccaaagcaaatggt
tctgaagaggagggtcatcgtctagctgcttatgaaactatcaaggtttacttgtccata
gcagattccactcttcaaaatgatctatttgaaagagctttccaaaagttgaagggagaa
gaggttgataaattcatcagagaatctgttatggatcttctcagagttcttgttccctac
caaggtccagataatattgctatattgtacaatcttatcaaagaaggcattgcagaaacc
aaaaacaatcgttaccagaagaaatcatacaggctgttggaagtgctttgctcatctccg
tcagatatttgcattgcattccaaaatgaacatcttcaagatgtgcagaagctgttactt
aagtcactgtcatcatctgccaccaccagtcgtggggcacgactacgctgtctgatacac
ctagttcgtcgacttccagccaagaaagctaacattttaaaggagattgttcctgaagct
gttttatgtgtaaaagacatcaatgaacgttgcaggcagtctgcttttgcacttcttcat
gagcttggattggccatgtttagatggaaagaagaaaaactagataatgatgatgatgag
gaagacatgtctgaacgagatcacacagttattaaagatttcttagcactcatcttagca
ggtcttgctggctctcctcaaatgacaagtgcaacactcctagcgcttgctgatgttact
catcactttaaatctcaattccctgatgatcttctgcagcttttactagaaaatgtttgt
ttgttagccacttcaccaacccgtgaggttgctggatctgctattagttacttgaaacaa
tttgtttactcttttcctgcaactaccgttggaccatatgtccctgctattatgaaagct
tttgttacaatgactgatgattgtaagagacattttcggagagaaactcagcatatgcta
gatagaatgatgcgtaaatatggctgtgatgctattgagagacaagtgcctggagatgat
gaaatcatgttgaagcgtgtgcgtaatcttaggaaacttcatgctagaaagcagagggtg
cgggaggaacgtcttaagaacaaattggcagttgaagacagtgatgatgaagaattttca
gtcaaagctcgtgccaagagcattgaagaaattctcgctgaaagtgatgatgaattagat
cttgagaaaaaagaatctacctccaagggagcaaagaaaaagtcacaaacttggatcaaa
gaagaaccaggagatattatggatctggctgatacaatggctgctagtaaaattagtgcc
tccaaaccaagcactagtactgctaatggaatggcttttgaaaagtcttcaaagaaagat
aaaaatcgtggctttaaaactgcgcctgatggtcggcttatcattgctgacaatgataat
gacagcagtgatgaggaaggtaaaaggaaaataaagggtagtaaacgaatccctaccgtc
tctgattctgaatcagatgatgataatgatcaagataatgacggtgatgcaatgagctca
aggagtggtcctacggtgaaaggacgcaaaagaaaactaagtgctaatacagatgctcgc
agcacaactactgcaggtcctagtgctaaataccaagctggtggatctggtatccatagg
cctacaagcacagctatgagtgtaaagagtggagcaagtggtaagacagcagcaaccgga
aagtcttctgcatccaatgcatttggctcggaataccgctcaaagaaggcaaagggtgat
gtgaagaagaagggtgctccagatccttatgcatatgttcctctaaatagagctctatta
aacaaaaggaaaaaactaaagcaagcagggcagtttaaaggccttgttcgagcggcaaga
aagggtgctgcagccggacgtgttgctaagacccgtgtctcccgtaaataa
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