Frankliniella occidentalis (western flower thrips): 113218023
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Entry
113218023 CDS
T07591
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
foc01009
]
113218023
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113218023
Enzymes [BR:
foc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113218023
Protein phosphatases and associated proteins [BR:
foc01009
]
HAD phosphatases
Fcp/Scp phosphatases
113218023
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113218023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
113218023
NCBI-ProteinID:
XP_026293947
UniProt:
A0A6J1TMC5
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MESSFGLSASKQPSKTSRRSKCLPRRAQDLSKEELLLTLKKKRECNAKALTIVEGMLEPI
VTKDWFLDVLHHINQSHLQDVIEERAIVNLCGYPLCSNKLKSIPSQQYRISTKVNKIYDI
TERKNFCSNKCFKAFKFIRDQMYTSPLWLRDIEPNVKFILMPSTECGGDIGDEVNVQIER
VSKDELKKLSGEENSSSSHQAEGNLSLSDALTNLHIVATMRENTPLHFSEGLKRTECEEK
NNLHLIEKSGENSPVPNVKDYVQKDTCTSSVERKISEKCGGMSSDSHVPPLISLKGDDTH
QVHSLQTERENFFEKVIVKEDGNEVKGPGPGSNAQDTADLACETSSVPVSTSIPSSCAPE
NTTDVQKSSSRYVTRKTFNDKKTIERVECLNQKPSMKHDSSLSGSNSEWAINQPDCSSSK
ICHQLPQSSKKNRDTKLDNPADHIASKKTKLDSGSSKLLPTVFYVEKCVREWFTMETMCF
LFGETTLKEMLENKGESIQKHYKALSTTTWDQEKHDRFLAICKRLNLLEMEDTNFDSQVI
KSESDSVRKPLPNYEVLKREAEAMELKINAFYKGKMELDEKKVTFAQDVKTDSSDVRSDS
EVQIPLVHLHAQRALRKRIVLDGLNRVLPDFLRTFGMRPSELTSSIRGLVGTFALSATNI
TFKPQEWSLLGLIIIKLLTLKETNLKQCLQQEQSNTYLTLMLMSYKQEPGYLDRLLSWLT
DIDMLLARPQC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtagttttggcttgagtgcctccaaacagccgtccaaaacgtcaagaaggtca
aaatgtttgccccgtcgagctcaagacttaagtaaagaagagttacttctcactttgaag
aagaagcgagaatgtaatgccaaagctctaacaattgttgagggaatgctggaacccatt
gttacgaaggactggttcctagatgttctccatcacatcaatcagagtcatttacaagat
gttattgaagaaagagccatagtcaacctttgtggctatccgttatgctctaataagcta
aaaagtattccatcacagcagtatcgtatatctacaaaggttaacaagatttatgatatc
acagaaagaaagaatttttgcagcaacaaatgtttcaaagcatttaaatttatcagagat
caaatgtacacaagccccctgtggcttcgtgatattgagcccaatgttaagtttattttg
atgccatcaaccgagtgtggcggagatattggtgatgaagtcaatgttcaaattgaaaga
gtttcgaaagatgaacttaagaagttgtctggagaagagaactcttcctcttctcatcaa
gctgaaggaaacttatcccttagtgatgctcttaccaatttgcatattgttgctacaatg
agagaaaataccccgttacatttttcagagggcttaaaacgcacggaatgtgaggaaaag
aataatttgcacctaattgaaaaatcaggagaaaactctccagtacctaatgtaaaagat
tatgtacaaaaggacacatgcacaagcagcgttgagagaaaaatttctgaaaaatgtgga
ggtatgtcaagtgattcccatgttcctcctttaatctccttaaagggagatgatactcac
caagttcacagtcttcaaacagaaagagagaatttttttgagaaagtgattgttaaagaa
gatggtaatgaagtaaaaggaccaggaccagggtcaaatgctcaggatactgctgacttg
gcatgtgaaacctcgtccgtacctgtaagcacgtctatcccttcttcctgtgccccagaa
aacacaactgacgttcaaaaaagttcttcaagatatgtaacaaggaaaactttcaatgat
aaaaaaaccattgaaagagttgaatgtttgaatcagaaaccaagtatgaaacatgatagc
tctttatccgggtccaattctgagtgggccatcaatcagcccgactgttcatcaagtaaa
atatgtcatcaactccctcaaagctctaagaaaaatagagacacaaagcttgacaatccc
gctgatcatatagcttccaaaaagactaagttagactccgggtcttccaagttactccct
acagtattttatgttgaaaaatgtgtacgggaatggttcactatggaaacaatgtgcttt
ctatttggagaaactactctcaaagagatgctggaaaataaaggagaaagtatccagaaa
cattataaagctctcagtactactacctgggaccaggaaaaacatgatcgttttcttgct
atttgtaaaaggctgaacttacttgaaatggaagacaccaactttgatagccaggtgata
aaaagtgagagtgattctgtacggaaacccctcccaaattatgaagttttgaaaagagaa
gcagaggcaatggagctgaaaataaacgcattctacaaggggaaaatggaattagatgaa
aagaaagtcacatttgctcaggatgtcaaaaccgattcttctgatgtgagaagtgacagt
gaagtacaaattcctctggtgcatttgcatgctcaacgagccctccgaaaaagaattgtg
ctcgatggacttaacagagtgttgcctgattttttacgtacttttggtatgagaccaagt
gaactgacaagttctatcagaggtttagtgggcacctttgccctttctgccacaaatatt
acattcaaaccccaggaatggagtcttcttggactaatcatcatcaagctgctgacactg
aaagaaacaaatctgaagcagtgtttacaacaggagcagtcaaacacctatttaacatta
atgcttatgagctacaagcaagagccaggatacctagacagacttctttcgtggcttaca
gatattgatatgctacttgctcgtcctcagtgttga
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