KEGG   Frankliniella occidentalis (western flower thrips): 113218078
Entry
113218078         CDS       T07591                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
foc  Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:foc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:foc03041]
    113218078
Spliceosome [BR:foc03041]
 Complex B
  Other components
   Complex B specific factors
    113218078
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 LisH_TPL Beta-prop_RIG_2nd Beta-prop_ACSF4 Ge1_WD40 Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF12 RMC1_N WD40_RFWD3 Beta-prop_BBS7 Beta-prop_IP5PC_F Beta-prop_LRRK2 Beta-prop_WDR75_2nd VPS8_N DUF7899 WDR54 PROPPIN LisH_WDR26 zf_topless
Other DBs
NCBI-GeneID: 113218078
NCBI-ProteinID: XP_026294051
UniProt: A0A6J1TTU6
LinkDB
Position
Unknown
AA seq 510 aa
MSIEIESADVVRLIQQYLKESNLLKTLQTLQDETGVSLNTVDSIDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIVMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAAIAQALSGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAIKEQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKVRKDLKYQAQDNFMMMEEAVLCMSFSRDSEMLASGSQDGKIKVWRIQTGQCLR
RFEKAHSKGITCLQFSRDNSQVLSASFDTHIRIHGLKSGKPLKEFRGHASFVNEAVFTPD
GHSILSASSDGTVKLWNVKTTECTNTFTSLGASDIAVNSIHIMPKNPEHFVICNRTNTVV
IMNMQGQIVRSFSSGKREHGDFVCAVLSPRGDWIYCVGEDLVLYCFSVQSGKLERTLNVH
EKDVIGVAHHPHQNLLCTYSEDGLLRLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtctattgaaatagaatctgccgatgtggtacgtttgattcagcaatatctcaaagag
agtaatctcttaaaaactctccaaacactacaggatgagactggagtgtctttgaataca
gtagacagtattgatggatttgtcgctgatattaataatggtcattgggatacagtttta
aaggctatccagtctttaaaacttccagacaaaaaattgattgacctctatgaacaggtt
gtattggaacttattgagctgcgagagcttggtgctgcaagatctttactaagacagact
gatcccatgattgtaatgaaacaacaagaaccagagagatacattcatcttgaaaactta
ctagcgaggtcttactttgatccacgagaagcatatcctgatggcagcaccaaggagaag
cgccgagctgccattgctcaagctttatctggtgaagtgtcagtagtcccctcatctcgt
ttgcttgctcttctcggacaagcattgaaatggcaacagcatcaaggacttcttccccca
ggaacaaccatagatttgtttcgtggtaaagctgccattaaagaacaagaagatgaaaag
tacccaactcagctatcaaaacagatcaaatttggtcagaaatctcatgttgaatgtgcc
cgcttttctcctgatggccaatatcttgttactgggtctgtggatggtttcattgaggta
tggaacttcaccacaggcaaagttcgtaaggatttgaaatatcaagcacaggacaacttc
atgatgatggaagaggctgtactgtgcatgtctttctctagagattctgaaatgcttgca
tctggttcacaagatggtaaaatcaaagtatggcggatccaaacaggtcagtgcctacgt
cggtttgagaaggctcattccaaaggcattacgtgcctgcagttttctagggacaacagt
caagtattgtctgcttcttttgatacacacatcagaatacatggtttgaagtcaggtaaa
cctttaaaagagttcagaggtcatgcctcttttgtaaatgaagctgttttcacaccagat
ggccacagtattctcagtgcgtcatctgatggaacagtcaaattatggaatgtgaaaaca
actgagtgcaccaatacgtttacttctcttggagcatctgacatagctgtgaacagcatt
catattatgccaaaaaatccagaacattttgttatttgtaatagaacaaacacagttgtt
attatgaatatgcaaggacagattgtacggtctttctcaagtggtaaaagagagcatggt
gattttgtgtgtgctgtgttatctcctcgaggtgactggatttattgtgtaggagaagat
ctagttttgtactgcttctctgtacaatcaggaaaactggaaagaacacttaatgttcat
gaaaaggatgttattggtgtagctcatcaccctcatcaaaatctgttatgcacttatagt
gaagatggtcttttgagactatggaaaccttaa

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