Frankliniella occidentalis (western flower thrips): 113218231
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Entry
113218231 CDS
T07591
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113218231
Membrane trafficking [BR:
foc04131
]
Protein recycling
Others
EARP complex
113218231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Motif
Other DBs
NCBI-GeneID:
113218231
NCBI-ProteinID:
XP_026294277
UniProt:
A0A6J1TN93
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MAVMGDFKQRFSGLLNKLGNQSRLSLSSPSEEILKPITSESNVNTIKKEDEKSLEHPIEI
LSDDEILEAVEKDYFKDTGFDPSRHELKKIGPKLNCEEILVQSERLHRQQKVVSKKVLSQ
ILTNQRACNEEFERIQNLQSLLRETLIICRDGRSKLNMGKQQLTTTSLGILANYRKRQLL
RDLLNSLNTIKTLQRSEEHIQVLLSENRYEDAISQLLECQSAAASLRRFACVAALSGKLQ
DTLVMTEEQLDVALGKICEKFDETLYGQLQAAYAQLGKTQAAMDQLHMHFTSAIQNTALK
VIKNFVGKSVQGAITSGKQYNELCKNVKEENFIPCLQELCTSLWRIVCSHHRVALWHQKH
LLDSSSANKGTELEVSFTNEYIRQKMESMQARIWHDVQARFSTYLFSSDLASFKFDNFLQ
VLGLVHRLMEVGEEFCGSQSEELQKSVRLQSENYFGKYHVGCLEELRIFLENESWTHCPV
KNDFSCLQLQEFRSLRGVIQNIHLHEQQKLQQSPDSSNQSQDGSSVAGGFFAKFAESGTP
FDLTTFDLQEEDILANIIDEPSGYFSDDSDEDVPEELRGDFVDEGHGENTMHSSEELEVQ
FENCERVRFEPKKATRGTKGRSRPPQGPLLTNTTLTVLRHCGKYLQMSRLLRTVAMDVII
CLTQLFQYYLYAVHTFFTSDLTVDQSSLYSIKLQATLKRINTDLIRPEKLPNSLQQISHD
DKKKVPQPHISPIVNLNNAESLFGLSERVVAVESLIFLAEQLDSLRPYLEYLVRHEPRKH
LVQQFYLQMVSVASDLRLPVYACISSRTLDLRSMLNMMGRVNWEIKEVSSQHSQYVDFIL
REMQIFSMRLEEVASHLFISKDVYDTLWEALIIVCCNTFVEGFSNAKKCATGGRALMQLD
FTQFTSKLQKLTTLRPIPYKEFVEVYVKAYYLPEELLEKWIREHTQYSSKHLLTLVHCTC
QNNKKTRQRLSGVIEELERLGSIK
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgatgggggacttcaagcaaaggttttcaggactgctaaacaaattggggaac
caatcaagattatcactgagcagtccttctgaggagattctaaagccgatcacaagtgaa
agcaatgttaatactatcaagaaggaggacgagaaatctctcgaacaccccattgaaatt
ctgtctgacgatgaaattttggaggcagtagagaaagattacttcaaagatacaggtttt
gatccgagcaggcacgaattgaagaaaattggtccaaagcttaattgtgaagaaatttta
gttcaatctgaacgacttcatagacaacagaaagttgtatccaaaaaggtgttgtcacaa
attctaacgaatcaaagggcctgtaatgaggaatttgaaagaattcaaaatctgcaatcg
ctcctgcgagaaacattgattatctgtcgagatgggcggtccaaactgaacatgggtaaa
cagcagctaaccaccacaagtttaggcatacttgctaactaccgcaaaagacaattactc
cgagatctactgaattcgttgaatactattaaaacacttcaaagatctgaggagcacatc
caggttttattgagtgaaaataggtatgaagatgcaatcagccaattgcttgaatgtcag
tctgctgctgcttctctgcggcgtttcgcttgtgtagcagctttgagtggtaagcttcaa
gatacactagtcatgaccgaagaacaactggatgtggctttaggaaagatttgtgaaaaa
tttgatgaaacattatatgggcagctgcaagcagcctatgcccagttaggcaagactcaa
gctgcaatggatcaactacatatgcattttacatctgctatccagaacacagctctgaaa
gttattaagaattttgtaggcaaatctgtacagggtgcaattaccagtggcaagcaatac
aatgagctgtgtaagaatgttaaagaagaaaatttcattccttgtttacaagagctatgc
acaagtttatggagaattgtttgcagtcatcatagagttgctctttggcatcagaaacat
ttacttgacagcagctcagcaaacaaggggactgaattggaagtgagcttcacaaatgaa
tacatccgacagaaaatggaaagcatgcaagctagaatatggcatgatgtgcaagctcgc
ttttctacttacctcttttcaagtgacctagcttcattcaaatttgacaactttcttcaa
gtcttgggtcttgtgcacagattaatggaagttggagaagagttctgtggcagtcagtca
gaagaactgcagaagtcagttagactgcaaagtgaaaattattttggaaaatatcacgta
ggttgtttggaggagcttcgtattttcctagaaaatgaaagctggacacattgccctgtg
aagaatgacttctcgtgcctacagcttcaggaatttcgctctttgagaggtgtaattcaa
aatattcacctgcatgagcaacagaagctacaacagagcccagacagtagtaaccaatcc
caggatggtagttcagttgctggaggattctttgctaaatttgcagaatctggcactcca
tttgatttaacaacctttgatttgcaagaagaggacattcttgcaaacattattgatgag
ccttctggatacttcagtgatgatagcgatgaggatgttcctgaagagctgagaggggat
tttgttgatgaaggtcatggtgaaaatacaatgcattcaagcgaggagcttgaagttcag
tttgaaaactgtgaacgtgtacgttttgaacccaaaaaggcaactagaggaaccaaagga
cgctctcggccgccacagggcccattacttacaaatactacattaactgttttaaggcat
tgtggaaagtatttacaaatgagtcgactattacgcactgttgcaatggatgtcataata
tgcttgacccagctctttcagtattatctttatgcagtgcacacattcttcacatctgat
ttgactgttgatcaatcaagcctatacagtataaaacttcaagctacattaaaacgaatt
aacactgacttaattcgtccagaaaaacttccaaatagtcttcaacaaataagtcatgat
gacaaaaaaaaggtgcctcaacctcacatatctcccattgttaatctaaataatgcagaa
agcttatttgggttatcagaacgtgtagtggctgttgaatctttaatattcttggcagag
caactggatagtctgcgaccttacttggaatacttggtccgtcatgaaccaaggaaacac
ttggttcaacaattttatttacaaatggtcagtgtggcctccgacttgagattacctgta
tatgcttgcatatcttcaaggacacttgatctacgctccatgttaaacatgatgggacgt
gttaattgggaaataaaagaggtttcaagtcaacacagtcagtatgttgatttcattttg
cgggagatgcagatttttagtatgcgtttagaggaggtggcctctcatttattcatttcc
aaagatgtctatgataccctatgggaagctttaattattgtttgctgtaacacttttgta
gaaggattttctaatgcaaagaagtgtgcaactggtgggagagctcttatgcaacttgat
tttactcaatttacttcaaagctccaaaaacttactaccttacgtcctattccgtacaag
gagtttgttgaagtttatgttaaagcttactacctcccagaagaacttttagaaaaatgg
attcgagaacacacgcaatactcaagtaaacatcttctaactcttgtgcattgcacttgt
caaaataataagaagactcgccaaagactgtcaggtgtcattgaagagcttgaacgtctt
ggttcaattaagtag
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