KEGG   Flavobacterium oreochromis: JJC03_08330
Entry
JJC03_08330       CDS       T08111                                 
Name
(GenBank) ATP-binding cassette domain-containing protein
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
foe  Flavobacterium oreochromis
Pathway
foe02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:foe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    JJC03_08330
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:foe02000]
    JJC03_08330
Enzymes [BR:foe01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     JJC03_08330
Transporters [BR:foe02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    JJC03_08330
 Other transporters
  Pores ion channels [TC:1]
   JJC03_08330
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N NB-ARC AAA_13 AAA_29 AAA_23 AAA_22 MMR_HSR1 DUF87 AAA_15 ATPase_2 Ski2_beta-barrel AAA_14 MeaB AAA_18 nSTAND3 AAA DUF5906 DO-GTPase2 AAA_16 MobB
Other DBs
NCBI-ProteinID: QYS87742
LinkDB
Position
1747364..1748038
AA seq 224 aa
MEYKLEIDSVNKSFGGKKVLSDIYLKCEIGEIVGIFGRNGSGKSTLLKILFGTLKAENSF
IRLNNKVLTQSFKMENGISYLPQNNFIPNNFSVIKTVNLTIEENRVDEFWEDNIIQKLKN
SSVGELSVGELKYLQIKLILFNKSKFCLLDEPYSGISPAIATEINKQIKEQSKNKGLIIT
DHNYSHLLEITTKIYLINKGCGRYLENETELVKFGYLNEGMLKK
NT seq 675 nt   +upstreamnt  +downstreamnt
atggaatataaattagaaattgacagcgtaaataaatcatttggcggaaaaaaagtatta
tcagatatatatttaaaatgtgaaattggtgaaatagttgggatttttggtagaaatgga
agcgggaaatcaacgcttctaaaaatattatttggaactttaaaagcagaaaacagtttt
ataagacttaacaataaagtgttaactcaatcatttaaaatggaaaacgggatttcatat
ttgccacaaaataattttattccaaataatttttcagttataaaaactgtaaatctaaca
atcgaagaaaatagagttgacgagttttgggaggataatattatacagaaactaaaaaat
tcttcagtcggcgaactatcagtcggtgaattaaaatatctacaaatcaaattaatttta
tttaataagtctaaattttgtcttttagatgaaccttacagcggaatttctccagcaatt
gcaaccgaaattaataaacaaataaaagaacaatcaaaaaataaaggattaataataaca
gaccataactactcgcatttattggaaattacaactaaaatatacttgataaataaagga
tgtggaagatatttagaaaatgaaactgaattagttaaatttggttatctaaatgaagga
atgctaaaaaaataa

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