KEGG   Flavobacterium oreochromis: JJC03_10570
Entry
JJC03_10570       CDS       T08111                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
foe  Flavobacterium oreochromis
Pathway
foe03030  DNA replication
foe03430  Mismatch repair
foe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:foe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JJC03_10570
   03430 Mismatch repair
    JJC03_10570
   03440 Homologous recombination
    JJC03_10570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:foe03032]
    JJC03_10570
   03400 DNA repair and recombination proteins [BR:foe03400]
    JJC03_10570
Enzymes [BR:foe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JJC03_10570
DNA replication proteins [BR:foe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JJC03_10570
DNA repair and recombination proteins [BR:foe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JJC03_10570
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 Rv2179c-like DNA_pol_B_exo1
Other DBs
NCBI-ProteinID: QYS85634
LinkDB
Position
2208606..2209379
AA seq 257 aa
MELKLNRPICFFDLETTGTDISKDRIVEISIIKVFPNGNKESKTWLVNPTIPIPAQAAAI
HGISDEKVANEPTFAELANQVHNMIKDSDLAGFNSDRFDIPLLAEELLRAGVDFDMKNRV
SVDIQTIFHKKEERTLSAAYKFYCNQTLDNAHSAEADTNATYEILKAQLDRYSDLENDMK
VLSEYTTRKKSVDFAGFIALNDRGQEIFTFGKHKGALVEEVFDREPGYFGWIQNADFPLY
TKKVLTGIKLRKLNTKQ
NT seq 774 nt   +upstreamnt  +downstreamnt
atggagttaaaattaaatcgtccgatttgtttttttgacttagaaactactgggacagat
atttcaaaagatcgaattgttgaaatttcaataataaaagtgtttccaaacggaaataaa
gagagtaaaacatggttggtaaatcctactattcctattccagcgcaagctgctgctatt
cacggtatatcagatgaaaaagtggccaatgagcctacttttgcagaattagctaatcaa
gtgcataatatgattaaagattctgatttagcagggtttaattcagatcgttttgatatc
cctttgttagctgaagaattattgagagctggagttgattttgatatgaaaaatagagtt
tcggtagatatacagactatttttcataaaaaagaagaacgtacgttaagtgcagcttat
aaattttattgtaatcaaactttagataatgctcacagtgctgaagcggatacgaatgcc
acttatgaaattttaaaagcacaattagatcgttattctgatttagaaaatgatatgaaa
gtcttgtctgaatatacaactcgaaaaaaatcagttgattttgctggttttatagcttta
aatgatagagggcaagaaatttttacttttgggaagcataaaggggctctagtagaagaa
gtttttgatagagagccagggtattttggatggattcaaaatgctgattttcctctctat
actaaaaaggtattgacaggaattaagttaagaaagttgaatacaaaacagtaa

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