Flavobacterium oreochromis: JJC03_11175
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Entry
JJC03_11175 CDS
T08111
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
foe
Flavobacterium oreochromis
Pathway
foe02024
Quorum sensing
foe03060
Protein export
foe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
foe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JJC03_11175 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JJC03_11175 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JJC03_11175 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
foe02044
]
JJC03_11175 (ffh)
Enzymes [BR:
foe01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JJC03_11175 (ffh)
Secretion system [BR:
foe02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JJC03_11175 (ffh)
Eukaryotic Sec-SRP protein
JJC03_11175 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
CbiA
AAA_33
cobW
nSTAND3
AAA_31
CLP1_P
AAA_24
ATPase
APS_kinase
AAA_17
TsaE
ATP_bind_1
AAA_18
DUF3294
6PF2K
KTI12
NACHT
DO-GTPase1
ArsA_ATPase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QYS85723
LinkDB
All DBs
Position
2326501..2327850
Genome browser
AA seq
449 aa
AA seq
DB search
MFNNLSEKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTTRVKEKAL
GQDVLTTLQPGQLLVKIVKDELTELMGGDAQGINLSGNFSVILMSGLQGSGKTTFSGKLA
NFLKTKKNKKPLLVACDIYRPAAINQLHVVGEQIGVEVYSEPENKNAVEIAQNAIKYAKS
NGFTVVIVDTAGRLAVDEEMMTEIANVHKAITPNETLFVVDSMTGQDAVNTAKAFNDRLD
FDGVVLTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMDAIDVFYPERMADRILGMGDVV
SLVERAQAQYDEEEARKLQRKIAKNEFGFDDFLAQIQQVKKMGNMKDLVGMIPGANKALK
DVEIEDDAFKHIEAIIYSMTPAERSKPSLIDTKRKNRIAKGSGRKIEEVNQLLKQFDQMS
KMMKMMQGPGGKQLMKMMGGMKGSLPGMK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataatttatcagagaagttagataaggccttccatatattaaaaggacacgga
aaaattacagaagtaaatgttgcagataccttaaaagaggtacgtcgtgcattgcttgat
gctgatgttaactttaagattgctaaagattttactacaagagtaaaagaaaaagcatta
ggacaagatgtattaaccaccttacaaccaggacaattactagttaaaatcgtaaaagat
gaattaacagaattaatgggaggtgatgctcaaggaatcaatttatcaggaaatttctct
gttatattaatgtctggtttacaaggttcaggtaaaactactttttccggtaaattagcc
aatttcttaaagacaaagaaaaataaaaaaccattattagtagcttgtgatatttatcgt
ccagctgctattaatcagttacatgtggttggtgagcaaattggggtagaagtatattct
gaaccagaaaataaaaatgcagttgaaattgctcaaaatgcaattaaatatgctaaatca
aatggttttaccgtagttatagttgatacagcaggacgtttggcagttgatgaagaaatg
atgactgaaattgctaatgttcataaagcaattactcctaatgagaccttatttgtagtg
gactcaatgacaggtcaagatgcagtaaatacagcgaaagcgtttaatgatcgtttagac
tttgatggggtagtgcttactaagttagatggagatacacgtggaggagccgcaatatca
attaaatcagttgtaaataaaccaatcaaatttattggtacaggtgaaaaaatggatgct
attgacgtgttttatccagagcgtatggcagatcgtattttgggtatgggagacgttgta
tcattagtagaacgtgctcaagctcagtatgatgaagaagaagcacgtaaattacaacgt
aaaattgctaaaaatgaatttggttttgatgatttcttagctcaaatacaacaagttaaa
aaaatgggtaatatgaaagatttggtaggaatgataccaggtgctaataaagccttaaaa
gatgtagaaattgaagatgatgcttttaaacacattgaagccattatctattctatgaca
ccagcagaaagaagtaaaccatcgttaattgatacaaaacgtaaaaacagaatagccaaa
ggatccggtagaaaaatagaagaagtaaatcagttactcaaacaatttgatcaaatgagt
aaaatgatgaaaatgatgcaaggtccaggaggtaaacaattaatgaaaatgatgggaggc
atgaaaggaagtcttccagggatgaaataa
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