Flavobacterium oreochromis: JJC03_11295
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Entry
JJC03_11295 CDS
T08111
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
foe
Flavobacterium oreochromis
Pathway
foe03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
foe00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
JJC03_11295 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
foe03011
]
JJC03_11295 (rpsA)
Ribosome [BR:
foe03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
JJC03_11295 (rpsA)
Bacteria
JJC03_11295 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QYS85740
LinkDB
All DBs
Position
2355614..2357377
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AA seq
587 aa
AA seq
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MSEITKEQEQFLADFNWHNYAEGIDAVDAKNLQEFEDLVAKTFISTGAEEVVEGVVVRIT
ERDAIVDINAKSEGVISLNEFRYNPALKVGDKVEVLIDIREDKSGQLVLSHKKARTIKAW
DRVIAANESGEIVNGFVKCRTKGGMIVDVFGIEAFLPGSQIDVKPIRDYDQYVNKMMEFK
VVKINHEFKNVVVSHKALIEADIEVQKKEIIGQLEKGQVLEGVVKNITSYGVFIDLGGVD
GLIHITDLSWSRINHPSEVLELDQKLNVVILDFDDEKTRIQLGLKQLNAHPWDALDANLA
VGDKVKGKVVVLADYGAFIEVAEGVEGLIHVSEMSWSTHLRSAQDFVKIGDEVEAVILTL
DREERKMSLGIKQLTNDPWTDITAKYPVGSKHTGTVRNFTNFGIFVELEEGIDGLVYISD
LSWTKKIKHPSEFVNVGDKLDVVVLELDVDARKLSLGHKQTTANPWDKHEDAFAVGTVHN
GTISEMVDKGATVDFGDDVVAFIPTRHLEKEDGKKLKKGDTADFKVIEFNKEFKRVVASH
TAIFREEEEKVVKEAESKTTSTQAEKSTLGDIDALAELKAKMERGEK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaattacaaaagaacaagaacaatttttagcagactttaactggcataactat
gctgaaggtattgatgcagtagacgctaaaaatttacaagagtttgaagatttagtagca
aaaacttttatttctacaggtgctgaagaagtagtagaaggtgttgttgttagaattact
gaaagagatgctattgttgatatcaatgcaaaatcagaaggtgttatttctttaaacgag
ttccgttacaatccagctttaaaagttggtgataaagttgaagttttaatcgacatccgt
gaagataaatcaggacagttagtattatctcacaaaaaagctagaactatcaaagcttgg
gatagagttattgctgctaacgagtctggagaaatcgttaatggtttcgtaaaatgtaga
actaaaggtggtatgatcgttgacgtattcggaatcgaagcattcttaccaggttctcaa
atcgatgttaagcctatccgtgactacgatcaatatgtgaataaaatgatggaattcaaa
gtggttaaaatcaaccatgaattcaaaaacgttgttgtatctcacaaagcacttattgaa
gctgatattgaagttcagaaaaaagaaatcatcggtcaattagaaaaaggtcaggtatta
gaaggagttgttaaaaacatcacttcttatggagtatttattgacttaggaggtgttgat
ggattaatccacatcactgacttatcttggtcaagaatcaaccacccatctgaagtatta
gaattagaccaaaaattaaacgtagttatcttagactttgatgatgagaaaacacgtatc
caattaggtttaaaacaattaaacgctcacccttgggatgctttagatgctaacttagct
gttggtgataaagtgaaaggtaaagtagttgttttagctgattacggtgctttcatcgaa
gttgctgaaggagttgaaggtttaatccacgtttctgaaatgtcttggtcaactcactta
agaagtgctcaagatttcgtgaaaattggagatgaagtagaagcagttatcttaacttta
gatagagaagagagaaaaatgtctttaggtatcaaacaattaactaacgatccttggaca
gatattactgctaaatacccagtaggttctaaacatacaggtacagtaagaaactttact
aactttggtatcttcgtagaattagaagaaggtattgatggtttagtatatatttctgac
ttatcttggactaaaaaaatcaaacacccatctgaattcgttaacgtaggtgacaaatta
gatgttgttgtgttagaattagatgttgatgctcgtaaattatctttaggtcacaaacaa
actactgctaacccttgggataagcatgaggatgcgttcgctgtaggtactgtacacaac
ggaactatctctgaaatggttgacaaaggtgcaactgtagatttcggtgatgatgttgta
gctttcatccctacacgtcacttagaaaaagaagatggtaaaaaattgaaaaaaggtgat
actgctgacttcaaagtaattgagttcaacaaagaattcaaaagagtagtagcatctcac
acagctatcttccgtgaagaagaagaaaaagtagttaaagaagctgaatctaaaactact
tctactcaagctgagaaatcaactttaggagatatcgatgctttagctgaattaaaagct
aaaatggaaagaggagagaaataa
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