KEGG   Flavobacterium oreochromis: JJC03_11355
Entry
JJC03_11355       CDS       T08111                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
foe  Flavobacterium oreochromis
Brite
KEGG Orthology (KO) [BR:foe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:foe03016]
    JJC03_11355
Enzymes [BR:foe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     JJC03_11355
Transfer RNA biogenesis [BR:foe03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    JJC03_11355
 Prokaryotic type
    JJC03_11355
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B_4 Lactamase_B Anti-Pycsar_Apyc1 PDEase_II
Other DBs
NCBI-ProteinID: QYS85751
LinkDB
Position
2366992..2367897
AA seq 301 aa
MNLTILGCYAATPRTFTNPTSQVLEISNRLFLIDCGEGTQTQLRKNKIRFTAINQIFISH
LHGDHFYGLIGLISTFTLLNRHNPLTIYGPVGIKEVIKLQLRLANSWPQYELNFVELKSK
KSEVIYEDKKIVVRTIPLKHRVYTNGFLFTEKTKERKLNVDKVQEYQIESCYFQNIKNGR
DITLDDGRVIPNHVLSFDPPKSESYAFCSDTQYDESIVPIIKGVQVLYHESTFLNAEEHV
AEKTMHSTAEQAAKIAHQANVGKLILGHYSTRYESIKLFKKEAESIFKNVLLGDDGANFK
F
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaatttaactattttaggctgttatgctgctacacctaggacattcacaaaccctaca
tcacaggttttagaaattagtaatcgattatttttaattgactgtggtgaaggaacacaa
acgcaattacgaaaaaataaaatccgttttacagctattaatcaaatttttatttctcat
ttacatggagatcatttttacgggttaattggtttgatttctacctttaccttattaaac
aggcataacccgctgactatttatggaccagtggggattaaggaagttattaagttacaa
cttcgtttagcaaattcatggcctcaatatgaattaaattttgtagagcttaaatcaaaa
aaatcggaagttatttatgaagataaaaaaatagtagtacgaacaattcctttaaaacat
agggtgtatacaaatggttttttatttacagaaaaaaccaaagaacgtaaactcaatgta
gataaagtacaggaataccaaatagagagttgttattttcaaaatattaaaaacggacgt
gatattactttagatgatggaagggtaattccaaatcatgttttaagttttgatccacct
aaatcagaaagttatgctttttgttctgatacccagtatgacgaaagtattgttcctatt
ataaaaggagtacaagtgctttatcatgaatctacattcttaaatgcagaggaacatgta
gcagaaaaaacaatgcattcaaccgctgagcaagctgctaaaattgctcaccaagctaat
gtaggtaaattaattttggggcattattcaacccgttatgaatctataaagctctttaaa
aaagaagctgaatctatatttaaaaatgttttattaggggatgatggtgctaattttaaa
ttctaa

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