KEGG   Flavobacterium oreochromis: JJC03_11375
Entry
JJC03_11375       CDS       T08111                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
foe  Flavobacterium oreochromis
Pathway
foe03030  DNA replication
foe03430  Mismatch repair
foe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:foe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JJC03_11375 (dnaX)
   03430 Mismatch repair
    JJC03_11375 (dnaX)
   03440 Homologous recombination
    JJC03_11375 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:foe03032]
    JJC03_11375 (dnaX)
   03400 DNA repair and recombination proteins [BR:foe03400]
    JJC03_11375 (dnaX)
Enzymes [BR:foe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JJC03_11375 (dnaX)
DNA replication proteins [BR:foe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JJC03_11375 (dnaX)
DNA repair and recombination proteins [BR:foe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JJC03_11375 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid AAA_22 AAA_14 RuvB_N DNA_pol3_delta_C AAA_30 AAA_5 AAA_16 nSTAND3 ResIII DNA_pol3_gamma3 TIP49 Rad17 AAA_24 AAA_7 NTPase_1 RNA_helicase AAA_19 AAA_18 RCF1-5-like_lid DUF815 AAA_assoc_2 NACHT NPHP3_N Mg_chelatase AAA_28 DUF7486 IstB_IS21 GNAT_acetyltr_2 Sigma54_activ_2 dNK SRP54 TsaE AAA_2 APS_kinase ABC_tran CbiA
Other DBs
NCBI-ProteinID: QYS85752
LinkDB
Position
2370122..2371207
AA seq 361 aa
MEQFIVSARKYRPQTFKDVVGQQAITNTLLNAIDNNHLAQALLFTGPRGVGKTTCARILA
RKINQEGYDDPNEDFAFNVFELDAASNNSVDDIRNLIDQVRIPPQTGKYKVYIIDEVHML
STAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVKDAKEHLAEVA
RSQDIVFEDDALHIIAQKADGAMRDALSIFDRVVSYCGKNLTRAAVTENLNVLDFEYYIK
VTDLILENKIPDLLLAYNEILAKGFDSHHFVAGLASHFRNLLVCKNPATLILLEAGEHAQ
KLYGEQAQKASQDFLLQGIELANDCDLKYKTSQNQRLLVELCLMQLASITFDGEKKKLTH
L
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaacagtttattgtatcagcacgtaaatatagacctcaaacatttaaagatgttgtg
gggcagcaggctattacgaatactttgttaaatgccattgataataatcatttagctcag
gcattgctatttacagggccaagaggagttggtaaaacaacttgtgctcgaattttagca
agaaaaattaatcaagaagggtatgatgatcctaatgaagattttgcttttaatgtattt
gagttagatgctgcttcaaataactcggtagatgatatacgtaatttaattgatcaagta
cgtataccacctcaaacaggtaaatataaagtttatattatagatgaggtacatatgttg
tcaaccgcagcttttaatgcttttttaaaaacattagaagagcctccaaagcacgctata
tttatactggctacaactgaaaaacataaaattatacctacgattttatctcgttgtcag
atttttgattttaaaaggattacagtaaaagatgctaaagaacatttagccgaagtagct
agaagtcaagatatcgtttttgaagatgatgctctgcatataatagcccagaaagctgat
ggtgctatgcgtgatgctttatctatttttgatcgagtagtttcttattgtgggaaaaat
ttaacaagagccgcagttacagaaaatttaaatgttcttgattttgaatattacattaaa
gtaacagatttaattttagaaaataaaattccagatttattattagcttataatgaaatt
ttagcaaaaggttttgatagtcatcacttcgttgcaggtttagcttcacattttagaaat
ttattagtttgtaaaaatccagcaacgttaatacttttagaagcaggagagcatgctcaa
aaattatatggagagcaagcgcaaaaagcctcacaagattttttattacaaggaattgag
ttagctaatgattgtgatttaaaatataaaacatctcaaaatcaacgacttttagtagag
ttgtgtttaatgcagttagcctctatcacttttgatggagaaaaaaaaaagctaactcat
ttataa

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