Flavobacterium oreochromis: JJC03_11385
Help
Entry
JJC03_11385 CDS
T08111
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
foe
Flavobacterium oreochromis
Brite
KEGG Orthology (KO) [BR:
foe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
foe03110
]
JJC03_11385 (clpB)
Chaperones and folding catalysts [BR:
foe03110
]
Heat shock proteins
HSP100
JJC03_11385 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_14
AAA_7
IstB_IS21
Mg_chelatase
Torsin
Zeta_toxin
AAA_3
AAA_18
DNA_pol3_delta2
TniB
ATPase_2
T2SSE
Roc
AAA_24
NACHT
AAA_28
TsaE
ResIII
NBD_SMAX1
AAA_25
DUF6092
DUF87
Motif
Other DBs
NCBI-ProteinID:
QYS85753
LinkDB
All DBs
Position
2372274..2374865
Genome browser
AA seq
863 aa
AA seq
DB search
MNLNNLTIKSQEALQQAQQIAQGNDQQQLENEHIFKGILEVDENVAPFILKKLNVNVELF
KKILESTIQSFPKVSGGDLMLSRDANTSLIEANNIAKKMNDEYVSIEHLILAIFKSKSKV
AQILKDQGVTEKGLESAIAEIRKGERVTSASAEETYNSLNKYAKNLNELARTGKLDPVIG
RDEEIRRVLQILTRRTKNNPMLIGEPGVGKTAIAEGLAHRIVDGDVPENLKNKIVYSLDM
GALIAGAKYKGEFEERLKSVVKEVTSAEGDIVLFIDEIHTLVGAGGGEGAMDAANILKPA
LARGELRAIGATTLDEYQKYFEKDKALERRFQKVNIDEPDTESAISILRGIKEKYETHHK
VRIKDDAIIAAVELSQRYITNRFLPDKAIDLMDEAASKLRMEINSKPEELDVLDRKIMQL
EIEIEAIKRENDEIKLKTLGLDLANLKEERNDIFARWKSEKDLVDAIQSVKLIIEDLKIE
AERAEREGDYGKVAEIRYGKIKEAQENLDNLQKQLNENQQGNSLIKEEVTQDDIAEVVAK
WTGIPVVKMLQSEREKLLKLEDELHKRVVGQEEAIQAISDAVRRSRAGLQDVKKPIGSFL
FLGTTGVGKTELAKALAEYLFDDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQL
TEAVRRKPYSVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNIGS
QIIQEKFENLAGSIEAATELAKVEVLGLLKQTVRPEFINRIDEIVMFTPLSNANIREIVA
FQLKSVTKMLAHQNITMDATPEAITYLSEKGFDPEFGARPVKRVIQREVLNQLSKEILAG
KVTTESMILLDCFDNQLVFRNQN
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaataatttaacaattaaatcacaagaagccttgcagcaagcacaacaaatt
gcgcaaggtaatgatcaacaacaattagaaaatgaacatatttttaaaggaattttagaa
gttgatgaaaatgtagccccgtttatcttaaaaaaattaaatgtaaatgtagagctcttt
aagaagatattagaaagtactattcaaagtttcccaaaagtatcgggtggtgatttaatg
ctttctcgtgatgcgaatacgtcattaatagaagcaaataatattgctaaaaagatgaat
gatgagtatgtttctattgaacatttaattttagctatttttaaatcaaaaagtaaagta
gctcaaatattaaaagatcaaggtgttacagaaaaaggacttgaaagtgccattgctgaa
atacgaaaaggtgagcgagttacatctgcatctgccgaagaaacatataattcattaaat
aaatacgctaaaaatttaaatgaattagctagaacaggaaagttagatccagttatagga
agagacgaagaaataagaagagtcttacaaatattaacaagacgtacaaaaaataatcca
atgcttataggggagccaggagtaggaaaaacagctatagcagaaggattagcgcatagg
attgtagatggagatgttccagaaaatcttaaaaataaaatagtttattctttagatatg
ggagctcttatagcaggagcaaaatacaaaggagagtttgaagaacgtttaaaatcagta
gtaaaagaagtaacttctgctgaaggagatatcgtcttatttatagatgaaattcacaca
ttagttggtgctggtggaggagaaggagctatggatgcagctaatattttaaagccagct
ttagctagaggtgaattaagagctattggggcaaccactttagatgaatatcaaaaatat
tttgaaaaagacaaagcattagaaagacgttttcaaaaagttaatattgatgaacctgat
acagaaagtgctatttctattttaagaggtatcaaagaaaaatatgaaacccatcataaa
gtacgtattaaagatgacgctattatagcagcagtcgagttgtctcaacgttatataaca
aatcgttttttaccagataaagctattgatttaatggatgaagcggcctctaaattgcgt
atggaaattaattcaaaaccagaagaattagatgtcttggatcgaaaaattatgcaatta
gaaattgaaattgaagcaataaaaagagaaaatgatgaaattaagttaaaaactttaggt
ttagatttagctaatttaaaagaagaaagaaatgatatctttgctcgttggaaatctgaa
aaagatctagtagatgcaattcaaagcgtaaaattaataattgaagatcttaaaatagaa
gctgaaagagcagagagagagggagattatgggaaagtagcagaaatcagatatggaaaa
ataaaagaagcccaagaaaatctagataatttgcaaaaacaattaaatgaaaatcaacaa
ggaaattctttaataaaagaagaagttacacaagatgatattgcagaagttgtagcaaaa
tggacaggaataccggttgttaaaatgttacaaagtgaacgagaaaaattattaaaatta
gaagatgaattacataaaagagtagtaggtcaagaagaagcaatacaagctattagtgat
gcagtgcgtagaagtcgtgcaggactacaagatgtaaaaaaaccaattggatcattctta
tttctaggtacaacaggtgttggtaaaacagaattagcaaaagctttagcagaatatctt
tttgatgatgaaaatgctatgactcgtattgatatgagtgaataccaagaacgtcatagt
gtaagtagattagtaggagctcctccaggttatgtaggatatgatgaaggaggtcaacta
acagaagcagttcgaagaaagccatattctgtagttttattagatgaaatagaaaaagca
catccagatacctttaatattttattgcaagttttagatgaaggaagattaactgataat
aaaggaagactagctgattttaaaaatacaatcattataatgacatctaatataggaagt
cagataatacaagaaaaatttgaaaacttagcaggatctatagaagctgctactgaatta
gcaaaagtagaagtcttaggtttgcttaaacaaacagttcgcccagaattcattaataga
atagatgaaatagttatgtttacaccgttaagtaatgctaatattagagaaattgtagct
tttcaattaaaaagcgtaacgaaaatgttagcacatcaaaacataactatggatgcaaca
ccagaagcgattacctatttatcagaaaaaggatttgatccagaatttggagcaagacct
gtaaaaagagtaattcaaagagaagttttaaatcaattatctaaagaaattctagctgga
aaagtaactacagaaagcatgattcttttagattgttttgataatcaattagtttttaga
aatcaaaattaa
DBGET
integrated database retrieval system
