Flavobacterium oreochromis: JJC03_11525
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Entry
JJC03_11525 CDS
T08111
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
foe
Flavobacterium oreochromis
Brite
KEGG Orthology (KO) [BR:
foe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foe03009
]
JJC03_11525 (rimK)
Ribosome biogenesis [BR:
foe03009
]
Prokaryotic type
ribosomal protein modification factors
JJC03_11525 (rimK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
R2K_3
Dala_Dala_lig_C
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
QYS87861
LinkDB
All DBs
Position
complement(2402164..2403516)
Genome browser
AA seq
450 aa
AA seq
DB search
MIGSEEWCSFPELEIPYIKARVDSGAKTSAMHATNITPFSKNGENWVKFDVNPLQGNVKI
TRHCEAKLIDKRIVKSSSGYREQRYVIKTNLSIGNETFPIEVTLANRDSMGFRMLLGREA
MVGKMMVDPEEKYLLGQPSFDEIKSHYHVNKESSAKLRIAVLASNPNLYSNRRIMEAGEM
RGHEMEFLNIKECYIKLDATTPEIHYRGGRVLDNFDAVIPRIRPSITYYGCTLIRQFEAM
KVFTLNSAAAITQSRDKLFSLQLLLQSGIDIPTTGFANSPLDTNDLIKMVGGSPLIIKLL
EGTQGKGVVLAETKKAAESVINAFKSLNANILVQEFIKEANGKDLRLFVVDGKVVAAMQR
EAAPGEFRANIHMGGSASVIKVTAAEKKIAIKAAKAMDLKVAGVDIIRSSKGPLLLEVNS
SPGLEGIEGATHKDIAGEMIKAIEKNFKIK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
attattgggagcgaagaatggtgctcctttcctgagttagaaattccttatattaaagca
agagtagattctggggctaaaacatcagctatgcacgccacaaacattactcctttttca
aaaaatggagaaaattgggtaaaatttgatgtaaatcctcttcaaggcaatgtaaaaata
actagacattgtgaagctaaattaattgataaaaggattgtaaaaagttctagcggctat
agagaacaacgttatgttattaaaacaaatttaagcatcggtaatgagacttttcctatt
gaagtaactcttgctaatagagattctatggggtttcgcatgcttttagggcgcgaagcc
atggttggaaaaatgatggttgatcctgaagaaaaatacctcttaggccaaccttcattt
gatgaaataaaatcacattaccatgttaataaagaatcaagtgctaaactaagaattgct
gtattagctagtaatcctaatttatacagtaaccgccgaattatggaagcaggtgaaatg
cgcggacatgaaatggaatttctaaatattaaagaatgctatataaaattagatgctact
actccggaaattcattatagagggggacgtgttttagataattttgatgcagttattcct
cgtattcgacctagtattacttattacggttgtactttaatacgtcaatttgaagctatg
aaagttttcactcttaactccgcagcagctatcactcaatcaagagataaactcttttct
ttacaattattattacaaagcggaattgacattcctacaactggatttgctaattctcct
ctagatacaaatgatttaattaaaatggtgggaggatctcctctaattatcaaattatta
gaaggcacccaaggaaaaggagttgttttagctgaaacaaaaaaagcagctgaatctgtc
ataaatgcttttaaaagcttaaatgccaatatattagtacaagaattcattaaagaagct
aacggaaaagatttacgccttttcgttgtagatggtaaggtagtagcagctatgcaaaga
gaagctgctccaggtgaatttagagctaatattcatatgggaggaagtgcttctgtgata
aaagtaacggctgctgaaaagaaaatagcaatcaaagcagctaaagcaatggatttaaag
gtcgcaggagtagatattatacgttctagcaaaggacctctattattagaagtaaactct
tctcctggcctggaaggcatagaaggtgcaactcataaagatattgcaggtgaaatgata
aaggctattgaaaaaaattttaaaataaaataa
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