Flavobacterium oreochromis: JJC03_11535
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Entry
JJC03_11535 CDS
T08111
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
foe
Flavobacterium oreochromis
Brite
KEGG Orthology (KO) [BR:
foe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
foe03032
]
JJC03_11535 (gyrA)
03400 DNA repair and recombination proteins [BR:
foe03400
]
JJC03_11535 (gyrA)
Enzymes [BR:
foe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JJC03_11535 (gyrA)
DNA replication proteins [BR:
foe03032
]
Prokaryotic type
DNA Topoisomerases
JJC03_11535 (gyrA)
DNA repair and recombination proteins [BR:
foe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JJC03_11535 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QYS85769
LinkDB
All DBs
Position
2406396..2408942
Genome browser
AA seq
848 aa
AA seq
DB search
MSEGEKLIPINIEDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLFGMHELGVFSNR
PHKKSARIVGEVLGKYHPHGDSSVYDAMVRMAQDWSLRYLMVDGQGNFGSIDGDSPAAMR
YTEARMKKFSEEMLADIDKETVDFQLNFDDTLEEPKVMPTKVPNLLVNGASGIAVGMATN
MAPHNLSEVVEGTLAYINNNDIEVDELATYIKAPDFPTGGVIYGMDGVREAFKTGRGRVV
IRAKVGFEEVEGREAIVVTEIPYQVNKAEMIKKTADLVNDKKIEGISTIRDESDRNGMRI
VYILKRDAVPNVVLNTLYKYTQLQSSFSVNNIALVNGRPQLLNLKDLIHYFVEHRHDVVT
RRAQFDLRKAEERAHILEGLIIASDNIDEVIALIRSSKDGEEARGKLIERFSLSEIQARA
IVEMRLRQLTGLEQDKLRAEYEEIMKLIAELKALLASKELRMDLIKEELLEVKEKYGDER
RSTIEYSGGDMSIEDLIADEQVVITISHAGYIKRTPLSEYKTQNRGGVGQKSAGTRDQDF
LEHMYVATNHQYMLFFTQKGKCFWMRVYEIPEGSKVAKGRAIQNLINIEQDDKVKAFICT
QDLKDQEYINSHYVIMVTKEGQVKKTSLEQYSRPRTNGVAAITVKDGDELLEAKLTTGNS
QVLIAGKSGKLVRFEEEKTRPMGRTASGVRGVTLADEKDEVIGMVSIDRDHVNDSQILVV
TENGYGKRTKLVDDDGEDVYRITNRGGKGVKTLNITEKTGSLIAINNVTDDDDLMIINKS
GLTIRMRVSDLRVMGRATQGVRLINIKGKDSIAAVCKVMREEEEESLEQNELNDHLTPDS
ETELENQE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagggagaaaagttaattccaattaacattgaagacgaaatgaaatcagcctac
attgattattcaatgtcagttattgtgtcaagggcgttaccagatgttagagatggttta
aaacctgtgcaccgccgcgtgttatttggaatgcatgaattaggagttttttctaataga
ccacataaaaaatcagctagaatcgtaggggaagtgttgggtaagtatcatccacatggg
gattcttccgtgtatgatgccatggtgcgtatggcgcaagattggagcttacgctattta
atggttgatggtcaaggtaactttggatcaatagatggagatagtcctgctgctatgcgt
tatacagaggctagaatgaagaagttctctgaagaaatgttagctgatattgataaagaa
actgttgatttccaattaaactttgacgatactttagaagaaccaaaagtaatgccaact
aaagtacccaatttacttgtaaatggagcatcaggtattgctgtagggatggctactaat
atggctcctcataacttatctgaagtagtagaaggaactttggcttatataaataataat
gatattgaagtagatgaattagctacttatatcaaagcacctgattttccaacaggagga
gttatttatggaatggatggagtgcgagaagcatttaaaacagggcgtggtcgtgtagta
atccgagctaaagttggttttgaagaagtcgaaggtcgtgaagcaatcgttgtaactgaa
ataccttatcaagtgaataaagcagaaatgattaaaaaaactgctgacttggtaaatgat
aaaaaaatagaaggtatatcaactatacgagatgagtctgatagaaacggtatgcgtatt
gtttatatcttaaaaagagatgctgtacccaatgttgtcttaaatacattatataagtac
acacaattacaatcctcatttagcgttaataatattgcgttagtaaatggtagacctcaa
ttattaaatctaaaagatttaatccattatttcgttgaacaccgtcatgatgtggtaaca
cgacgtgctcagtttgatttacgaaaagctgaagaaagagctcatattttagaagggtta
attattgcatctgataatattgatgaagttattgctcttatccgttcttcaaaagatgga
gaagaagcacgtggaaaattaatagaacgatttagtctttctgaaattcaagctcgtgct
attgtagaaatgcgattaagacagttaacaggccttgaacaagataagctacgtgcagaa
tacgaagaaattatgaagttaatagctgaattaaaagcattattagcaagtaaagaactt
cgtatggatttaattaaagaagaattactagaagttaaagaaaaatacggtgacgagcgt
cgttcaacaatagagtattcaggtggagatatgagcattgaagacttaattgctgacgag
caagttgttattaccatatcacatgcaggttatattaaacgtactcctctttcagaatac
aaaactcaaaatagaggaggagtgggacaaaaatcagcaggtactcgtgatcaagatttc
ttagaacatatgtatgtggctacaaaccatcaatatatgttgttctttactcaaaaagga
aaatgtttctggatgagagtatacgaaattccagaaggaagcaaagtagcgaaaggacga
gctattcaaaacttaatcaatatagagcaagatgataaagtaaaagcctttatttgtaca
caagatttaaaagatcaagagtatattaatagccattatgtaattatggttactaaagaa
ggacaagttaaaaagacctctttagaacagtattcccgtccacgtactaatggagtagcc
gctattacagtaaaagatggggatgaattactagaagcaaaattaacaacaggtaatagc
caagttttaattgcaggtaaatctggtaaattagttcgttttgaagaagaaaaaacccga
ccaatgggtagaacagcttcaggagtaagaggggtaactcttgctgacgaaaaagatgaa
gtaataggaatggtatctattgatagagatcatgtaaacgactctcaaatattagtagtt
actgaaaatggttatggtaaacgtactaaattagtagatgatgatggggaagatgtatat
agaattacaaaccgtggaggtaaaggagtaaaaactttaaatattactgaaaaaacaggt
tcacttattgctattaataatgttacagatgatgatgatttaatgataattaataagtca
ggattaactattcgaatgagagtttcagacttacgtgtaatggggcgcgctacacaagga
gtacgcttgattaatattaaaggaaaagattctattgcagcagtttgtaaagtaatgaga
gaggaagaggaagagagtttagaacaaaatgaattaaatgatcatttaacacctgattct
gaaacagaattagaaaaccaagaataa
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