Flavobacterium oreochromis: JJC03_12205
Help
Entry
JJC03_12205 CDS
T08111
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
foe
Flavobacterium oreochromis
Pathway
foe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
foe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JJC03_12205
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
foe01007
]
JJC03_12205
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
foe03016
]
JJC03_12205
Enzymes [BR:
foe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
JJC03_12205
Amino acid related enzymes [BR:
foe01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JJC03_12205
Transfer RNA biogenesis [BR:
foe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JJC03_12205
Prokaryotic type
JJC03_12205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ProRS-C_1
HGTP_anticodon
tRNA-synt_2b
Aq_1974-like
Motif
Other DBs
NCBI-ProteinID:
QYS85843
LinkDB
All DBs
Position
complement(2541619..2543097)
Genome browser
AA seq
492 aa
AA seq
DB search
MSKNLTKRADDYSKWYNELVVKADLAENSAVRGCMVIKPYGYAIWEKMQAQLDKMFKETG
HSNAYFPLFVPKSMFEAEEKNAEGFAKECAVVTHYRLKNDEERPGKLMVDPNAKLEEELI
VRPTSEAIIWSTYKNWIQSYRDLPLLINQWANVVRWEMRTRLFLRTAEFLWQEGHTAHAT
KQEALDETVQMMNVYADFVENFMAIPVVKGVKTANERFAGAEETFCIEALMQDGKALQAG
TSHFLGQNFANAFDVKFTSAEGKQEYVWGTSWGVSTRLMGALIMTHSDDNGLVLPPNLAP
IQVVIVPIFKSDEELEKISIVADELTKSLRKLGLSVKFDNRTTQKPGFKFAEWELKGVPV
RVAIGPKDLENGTFEIARRDTLSKQVIAKDATVEFIQDLMEKIQTEMFTKALNFRNTHIT
EVNSFEEFKDVLENKGGFVSAHWDGTGETEEKIKELTKATIRCIPLNRKDENGNCIFSGN
PSNGRVLFAKAY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaacttaacaaaacgcgcagacgattattctaaatggtataatgagctagta
gtaaaagcagatttagctgaaaattcagcagttcgcggatgtatggtaatcaagccttat
ggctatgccatctgggaaaaaatgcaagcacaattagacaaaatgtttaaagaaaccgga
catagtaatgcttattttccactatttgtccctaaaagcatgtttgaagcagaagaaaaa
aatgctgaaggttttgctaaagagtgcgctgtagttacacactaccgcttaaaaaatgat
gaggaacgaccaggaaaactaatggtagaccctaatgctaaattagaagaagaattaatt
gtacgtcctacatctgaagctattatttggagcacttacaaaaactggattcaatcttat
agagatcttcctttattaattaatcaatgggctaatgtagttcgttgggaaatgcgtaca
cgtttatttttacgcacagctgaattcttatggcaagaaggacatactgcacatgctaca
aaacaagaagcattagacgaaacagtacaaatgatgaatgtatatgctgatttcgttgaa
aacttcatggcaataccagtagtaaaaggagtaaaaacggctaacgaacgttttgcagga
gcggaagaaacgttttgtattgaagctttaatgcaagatggcaaagcattacaggcgggg
acttcacatttcttaggtcaaaacttcgctaacgcttttgatgtaaaatttacaagcgca
gaagggaaacaagaatatgtatggggaacttcttggggggtgtctactcgtctaatggga
gcgttaattatgactcactctgatgataatgggttagtactacctcctaacctagcacct
atacaagtagtaattgttcctatcttcaaatcagatgaagaactagaaaaaatatctatt
gtagcagatgaattaactaaatctttacgcaaacttggcctttcggttaaatttgacaat
agaacaacacaaaaacctggattcaaatttgctgaatgggaattaaaaggagtaccagtt
cgtgtagccataggccctaaagatttagaaaacgggacgtttgaaatagcacgtcgtgat
acattatcaaaacaagtcatagctaaagatgctactgtagagtttatacaagatttaatg
gaaaaaatccaaactgaaatgtttacaaaagcattaaattttagaaatactcatattaca
gaagtaaatagctttgaagaatttaaagatgtactagaaaataaaggaggttttgtatca
gctcactgggatggcacaggagaaactgaagaaaaaattaaagaattaaccaaagcaaca
atccgttgtatcccattaaatcgaaaagatgaaaatggaaattgtattttttcaggaaat
ccttcaaacggaagagtcttatttgcaaaggcttactaa
DBGET
integrated database retrieval system
