KEGG   Formosa sp. Hel3_A1_48: FORMA_00390
Entry
FORMA_00390       CDS       T04482                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
foh  Formosa sp. Hel3_A1_48
Brite
KEGG Orthology (KO) [BR:foh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:foh03016]
    FORMA_00390
Enzymes [BR:foh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     FORMA_00390
Transfer RNA biogenesis [BR:foh03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    FORMA_00390
 Prokaryotic type
    FORMA_00390
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4 Anti-Pycsar_Apyc1 PDEase_II
Other DBs
NCBI-ProteinID: AOR25237
UniProt: A0A1D7XPJ1
LinkDB
Position
complement(34859..35764)
AA seq 301 aa
MKLTILGCYSATPRIAAHTTAQILETRGHVFLIDCGEGTQMELRKNKIKFNQIKHIFISH
LHGDHCFGLIGLISTFRLLNRETNLHIYGPKGLKELILVQLKLSNSWINFELIFHEIESF
KSELIYEDDKLEVRTIPLDHRVYTNGYLFKEKPFDRKLDIDAAEANNIDVAYYRKLKQGE
DVLNNDGILISNSAVTSKGLVPKCYAFCSDTAYKEDIIPLINEVDVLYHESTFLEAHAKL
CSKTKHSTAKQAATIAKKAKVGTLILGHYSSRYSDLEEFRTEALAIFKAVELARDGKTFQ
I
NT seq 906 nt   +upstreamnt  +downstreamnt
gtgaaattaaccatattaggttgctacagtgctacacctagaattgctgcccatactaca
gctcaaattctggaaacacgaggccatgtttttttgattgattgtggcgaaggtacacaa
atggagctgagaaaaaacaagattaaattcaatcaaattaagcatatttttatttcgcat
cttcacggagatcattgttttggattaataggtttgatttctactttccgcttattgaat
cgcgaaactaatcttcatatttatggtccaaaaggactaaaggaacttattctagttcag
ttaaaactctctaattcatggattaattttgaattaatttttcacgaaatagagtccttc
aaatctgaactaatttatgaggatgataaacttgaggtccgcactattccattagatcat
agagtatatacaaatgggtatttatttaaggaaaaaccatttgaccgcaaattggatatt
gatgcggccgaagccaacaatatagatgtggcctattacagaaagttaaaacaaggtgaa
gatgtactgaacaatgatggtattttaatttcaaacagtgcggtaacttctaagggatta
gtgccaaagtgttatgccttttgtagtgatactgcatacaaagaagatatcattccatta
ataaacgaggttgatgttttataccatgagtctacttttttggaggcacatgccaaactt
tgtagtaaaactaaacattccacagcgaaacaagccgccactattgccaaaaaagctaaa
gtaggaactcttattttaggacactattcatcacgttacagcgatttggaagaatttaga
acagaagctttagccatatttaaagcagttgagctggctagagacggaaaaacttttcaa
atttaa

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