Formosa sp. Hel3_A1_48: FORMA_05360
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Entry
FORMA_05360 CDS
T04482
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
foh
Formosa sp. Hel3_A1_48
Pathway
foh02024
Quorum sensing
foh03060
Protein export
foh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FORMA_05360
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FORMA_05360
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FORMA_05360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
foh02044
]
FORMA_05360
Secretion system [BR:
foh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FORMA_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
DUF2811
Motif
Other DBs
NCBI-ProteinID:
AOR25718
UniProt:
A0A1D7XQX6
LinkDB
All DBs
Position
complement(574800..577745)
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AA seq
981 aa
AA seq
DB search
MFGLVSIYQLSFTFKANQIEEDAQQFSINKIAETEVDYDSKRSIERLNYLDSLKTQEVFN
IGIAAYNYDEVKEKAMNLGLDLKGGINVILQISVKDILVGLANDSKDPVFRQALADAEEL
QKDSQNTYLEDFFVAFEAIDADANLASPDIFANRTLSDEITFDMSDDEVKPILSAKIDES
IVSAFEVLRKRIDKFGVTQPNIQRIGNSGRILVELPGAKEVERVKGLLQSTAQLEFWDAF
KGEEFASFLFQANEVLKEVVDTSDEVDSDKTDEDSISDIIGDTDAETGEDGTVNPLIDLI
RASGYTGGPVLASFESKDQQTVTAYLNNPKVRALLSPEQRYAKFVWGIPQIQQTNEEDTQ
SIELVELYALKGNRENKPQLSGAVITDARQSYQQNGNPSVSMQMNLKGAKIWEQMTGNAF
NTGGQIAIVLDEIVYSAPGVTSGPIAGGNSEISGSFTLNEAVDLANVLRAGKLPASADIV
QAEEVGPSLGQEAIESGMKSFLIALAFVLLWMIFYYGKAGIFSNVALLLNILLIFGILSG
LGAVLTLPGIAGIVLTIGIAVDANVLIYERIREELYKGKGQKEAVRDGFSNALSSILDAN
ITTGLTALILYTFGTGPIKGFATTLLIGILTSLFTAIFISRLLIDWHLNRGGKLEFSTGM
TKGLFQSIKIEFLKKRKVAYLFSGVIITAGLMSLFTTGLDQGIDFVGGRTYTVRFAQDMN
TEEVKTAVNDAFGSAEVKTIGSANQLKISTKYKVNENSAEVDAEVQEKLYGALVPFLPDE
TSYKQFIDAENNIGKMYSGKVSPTIADDIKRSSVWAIIGSLIVVFLYILLRFKKWQFSLG
AVAAVFHDVLIVLGIFSIAWKYLPFSMEIDQAFIAAILTVIGYSLNDTVVVFDRIREYIN
EHSSWDFAKIVNGALNSTLSRTLNTSLTTLVVLLAMFVFGADSLRGLLFALIVGVLVGTY
SSVFIATPIMHDTLKRLDKKS
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
ttgtttggattggtgagtatatatcaattatcattcactttcaaagcaaatcaaattgaa
gaggatgctcaacagttttcaataaataaaattgctgaaacggaagtagattatgattcg
aaacgttcgatagaacgtttgaactatttagactcattgaaaactcaagaagtgttcaat
attggcattgctgcatacaattacgacgaagtcaaagagaaagcaatgaatcttggtctt
gatttaaaaggtgggatcaacgtcattcttcagatttctgtaaaagatattttagtaggt
ttggcaaacgacagcaaagaccctgtgttcagacaagctttggctgatgctgaagaactt
cagaaagacagtcagaacacttatttagaagacttttttgtagcattcgaagcaattgat
gcggatgcaaatttagcctcaccagatatttttgccaatagaacactcagcgatgagatt
acttttgatatgagtgatgatgaagtaaaacctatattatctgcaaaaattgacgaatct
atcgtttctgcttttgaagtcctaagaaaacgtattgataaatttggtgtaacgcaaccc
aacatacagcgtattggtaattcaggacgtattttggtcgaattgccaggagccaaagaa
gttgaacgtgtgaaaggattactccaaagtacggcacagcttgagttctgggatgctttc
aaaggcgaagaattcgctagtttcttattccaagctaatgaggttttaaaagaagtcgta
gacacatccgatgaagtagattctgataaaactgatgaagattccatttcagatattatt
ggtgatactgatgctgaaactggtgaagatggcactgtaaacccattaatcgatttgatt
cgtgcatcaggttacactggcggaccggtgcttgcatcttttgaatccaaagaccaacaa
acagtaacggcttatctcaataatcctaaggtcagagcattacttagccctgaacagcgc
tatgcaaaatttgtttgggggatccctcaaattcagcaaaccaatgaagaggatacacaa
agtattgagctagtagagctttatgctttaaaaggaaacagagaaaacaaaccacaattg
agtggtgctgtaattaccgatgcgcgtcaatcctatcagcaaaatggaaaccctagtgtt
tctatgcaaatgaaccttaaaggggctaagatttgggagcaaatgacgggaaatgcgttt
aatacaggagggcaaattgccatcgttttggacgagatagtttattctgctccaggtgtt
acatcaggacccatagcaggaggtaattcagagatttcgggatcgtttacgctcaatgaa
gcggttgatttagcaaatgttttgcgcgcaggtaaacttccggcttctgctgatattgtc
caggctgaggaagtagggccgtctttaggacaagaagctattgaaagtggtatgaaatcc
ttccttattgcattggcttttgtattgctttggatgatattttattatggaaaagcaggt
attttctccaatgtagccttgttgctcaatatacttttgatttttggaattttatcaggt
ttaggagctgtactaactctacctggaattgcgggtatcgttcttacaattggtattgca
gtagatgctaatgtgcttatatacgaacgtattcgtgaggagctgtataaaggtaaagga
caaaaagaagctgtccgtgatggcttttctaatgcattatcttcaattttggatgcgaac
attacaacggggcttaccgctttgattctatatacatttggtacaggtccaataaaagga
tttgcaacaacccttttaattggtattttaacctcactatttacggctattttcatttca
agactattgatcgactggcatttgaatcgcgggggtaaactcgagttttctacaggaatg
actaaaggattatttcaatcaattaagatcgaatttcttaaaaaaagaaaagtggcctac
ctcttttcaggagtgattattactgcgggattaatgtcgttgtttacaacaggcctcgat
caaggaattgattttgttggaggacgaacctatactgttcgctttgcacaagatatgaat
actgaagaggtaaaaactgctgttaatgatgcttttggtagtgcagaggtaaaaacaata
ggaagtgctaaccaattgaaaatttcaacaaaatataaagtcaatgaaaactctgctgaa
gttgatgctgaggttcaagaaaaactttatggtgcattggtgccattcttgccagacgaa
acatcatacaaacaatttatcgatgctgaaaataacattggaaaaatgtattctggaaaa
gtgagccctactattgctgatgacattaaaaggtcgtctgtatgggcaatcataggatct
ctgatcgtggtatttttatacatcttgctgcgcttcaaaaaatggcaattttcattaggt
gcagtcgctgcagtttttcacgatgtattgattgtactagggattttctccattgcttgg
aaatacttaccatttagtatggaaatagaccaagcatttattgctgcaatactaactgta
attgggtactctctaaacgatacagtggttgtgtttgatagaattagagaatacatcaat
gaacattctagctgggattttgctaaaattgtaaacggagccctaaacagtaccctgagt
agaacgttaaacacttctcttactactttagttgttttattagctatgtttgtttttggt
gctgattcacttcgtggtttgctcttcgctttgattgtaggggtacttgttggaacgtat
tcatctgtatttattgcaacaccaattatgcacgatacactaaagcgtttagataaaaaa
tcctaa
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