Formosa sp. Hel3_A1_48: FORMA_05440
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Entry
FORMA_05440 CDS
T04482
Name
(GenBank) ATPase (DUF853)
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
foh
Formosa sp. Hel3_A1_48
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foh03400
]
FORMA_05440
DNA repair and recombination proteins [BR:
foh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FORMA_05440
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
ResIII
AAA_10
Zot
P-loop_TraG
AAA
FtsK_SpoIIIE
AAA_16
AAA_30
CbiA
T2SSE
nSTAND3
AAA_7
Zeta_toxin
AAA_6
AAA_19
SRP54
IPT
Hydrolase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AOR25726
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All DBs
Position
585865..587358
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AA seq
497 aa
AA seq
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MTSKKEFYNHIVRGNTFEGEAISLGAARLNQHTLSKAFVKVPLKTMNRHGLIAGATGTGK
TKTLQILAEQLSEKGVPVVLMDIKGDLSGLAKPSAGHPKINERHKAIGLPFTPKGYPVEF
FSISAQNGVRLRATVSEFGPILISRILNLTEIQSGIVSVLFKFCDDHKLPLLDLKDFKAI
LNFATNEGKKEFQSAYGRISKTSTGAILRRIIELEQQGADLFFGEESFAVNDFVRYTSTG
AGYINIIRLDDIQNKPKLFSTFMLSLLAELFESFPETGDIDKPKLVMFIDEAHLIFNEAS
KQLLDQIEYTIKLIRSKGIGIYFVTQNPSDVPENILGQLGLKVQHALRAFTAKDRKNIKL
TAQNYPVTSFFNTEKTLTTMGIGEALVTALDEKGRPTPLSAALMRAPKSQMDILNPDELF
ELCNSSKLSKKYNKTIDRQSAYELLGAKIKRINHMRPQQDSNQTPKRKGRQRQHPIVKVL
TSATFIRAVFGILKKVV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaaaaaagaattctacaatcatattgtacgcggaaacacattcgaaggtgaa
gccatttccttgggtgcagccagacttaaccaacacaccttatcaaaggcttttgtaaaa
gttccattaaaaaccatgaacaggcatggactcattgcaggcgctacaggtacaggaaaa
acaaaaacacttcaaattttagcagagcaattaagcgaaaaaggagtgcccgttgtcctt
atggacataaaaggtgatttgagcggattagccaaacctagcgctggacatccaaaaatt
aacgagcggcacaaggcaattggactccctttcactccaaaaggttatccagttgaattc
ttttcaatttcagcacaaaatggtgttcgcttgagagcaacagtaagtgaatttggaccc
atacttatttctagaatcttaaacttaactgaaatacagtcaggaatagtctctgttctg
ttcaagttctgcgacgatcataaacttccattattagatttaaaagattttaaagccata
ctaaactttgcaaccaatgaagggaagaaagagtttcaatctgcctatggtcgaatttca
aagacctcaactggtgctattttgagacgtattattgagttagaacaacaaggtgcagat
ttgttttttggagaagaaagtttcgccgtcaatgattttgtgcgctatacatctactggc
gcagggtatattaacatcataaggctagatgatatacaaaacaaacccaagttattttca
acatttatgctcagtcttttggcggagctttttgaaagctttcccgaaactggagatata
gacaaaccaaaactggtaatgtttatcgatgaagcgcatttgatttttaatgaagcctca
aaacagcttttagatcaaattgagtacacaattaagcttattcgaagtaaaggcataggg
atttattttgtaacgcaaaacccaagtgatgttccagaaaatattcttggacagttgggc
ttaaaagttcaacatgctttgcgcgcctttactgctaaagatcgtaaaaacataaaacta
actgcgcaaaactatcctgtaacttcattttttaacacagaaaaaactcttactacgatg
ggtattggtgaagcattggtaaccgccttggacgaaaaaggccgtccaactcctctgagt
gctgcattgatgcgggctccaaaaagccaaatggatattttaaaccccgatgaattattt
gaactttgtaattcatctaaactttcaaaaaaatacaataaaactatcgatagacaaagt
gcttatgaactattgggcgccaaaatcaaaaggattaaccacatgaggccccaacaagat
tcaaatcaaaccccaaaaagaaaaggcagacaaagacaacacccaattgttaaagtccta
actagcgctacttttattcgagctgtatttggaattctgaaaaaagtcgtttag
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