KEGG   Formosa sp. Hel3_A1_48: FORMA_05500
Entry
FORMA_05500       CDS       T04482                                 
Name
(GenBank) signal recognition particle, subunit Ffh SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
foh  Formosa sp. Hel3_A1_48
Pathway
foh02024  Quorum sensing
foh03060  Protein export
foh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:foh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FORMA_05500
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FORMA_05500
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FORMA_05500
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:foh02044]
    FORMA_05500
Enzymes [BR:foh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FORMA_05500
Secretion system [BR:foh02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FORMA_05500
  Eukaryotic Sec-SRP protein
   FORMA_05500
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW Zeta_toxin CbiA AAA_24 AAA_33 6PF2K Fe-ADH KAP_NTPase AAA_22 APS_kinase CLP1_P nSTAND3 TsaE NACHT KTI12 NPHP3_N AAA_18 ATP_bind_1 AAA_19 DO-GTPase1 ResIII AAA_16 AAA_31 AAA_17 AAA_14
Other DBs
NCBI-ProteinID: AOR25732
UniProt: A0A1D7XQX9
LinkDB
Position
complement(590958..592289)
AA seq 443 aa
MFNNLSEKLDKALHVLKGHGSITEINVAETLKEVRRALLDADVNYKIAKDFTNSVKEKAL
GQNVLTTLQPGQLMVKIVKDELTELMGGDAEGINLSATPSVILMSGLQGSGKTTFSGKLA
QYLKTKKSKKPMLVACDVYRPAAIDQLHIVGEQVAAEVYSDIGNNDPVAIAKAGIAEAKS
KGCDVVIVDTAGRLAVDQEMMTEIANIHKAVTPQETLFVVDAMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDVFYPARMADRILGMGDVV
SLVERAQEQFDEQEARKIQKKIAKNQFGFDDFLSQIQQIKKMGNMKDLMGMIPGMGKMMK
DVDIDDDAFKHIEAIIHSMTPKERSNPSIINASRKKRIGTGSGTSVQEVNKLMKQFNQMS
KMMKMMQGGKGRNMMQMMKNMPQ
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgttcaataatttaagtgagaaattagataaagctttacatgtgcttaaagggcacggt
agtattactgagattaacgttgcggaaactctaaaagaagtacgacgtgcactactcgat
gctgatgtcaattacaaaatagcaaaagatttcaccaacagtgtcaaagagaaggcactg
ggtcaaaacgtactcactactttacaacctggccaattgatggtcaaaattgtaaaagat
gagctcactgaactcatgggtggagacgcagagggcatcaatctttctgcaacgccttct
gtcattttaatgtctggtttacagggttctggtaaaacaacattttctggaaagctagca
cagtaccttaaaacaaagaaatccaaaaagcccatgttagtcgcttgcgacgtataccgt
cctgcagcaattgatcagctacatattgtaggggagcaagttgcagcggaggtttacagc
gacattgggaataatgatcccgtagctattgctaaagcaggtatagcagaggccaaatca
aaaggatgtgatgtagtgattgttgatactgctggacgattggctgtcgatcaagagatg
atgacagagattgctaatattcacaaggcagtgacccctcaagaaactttatttgtagtg
gatgcgatgacgggccaagatgctgttaacaccgccaaggcatttaacgatattttaaat
tttgatggtgttattctcacaaaactagatggtgacactagaggtggggcggctatttct
atcaaatcggttgttaataaacccattaagtttattggaactggagaaaagatggaagct
attgatgtgttctatccagcgcgaatggccgaccgaattttggggatgggcgatgtagtt
tctttggttgagcgcgctcaagagcaatttgacgagcaagaagcacgtaagattcaaaag
aaaattgcaaaaaaccaatttggatttgatgattttttgtctcaaattcaacaaatcaag
aaaatggggaacatgaaggacctcatgggtatgattccaggaatgggcaaaatgatgaaa
gacgtagatatagacgatgatgcgtttaagcatattgaagctattattcattccatgacg
ccaaaagaacgctctaacccctctatcatcaatgcgagccgcaaaaaacgcattggtact
ggctctggcacatctgtgcaagaagtgaataagctgatgaaacaattcaatcagatgagt
aaaatgatgaaaatgatgcaaggtggtaaaggacgaaacatgatgcaaatgatgaaaaat
atgccacaataa

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