Formosa sp. Hel3_A1_48: FORMA_06310
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Entry
FORMA_06310 CDS
T04482
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
foh
Formosa sp. Hel3_A1_48
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foh03009
]
FORMA_06310
Enzymes [BR:
foh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FORMA_06310
Ribosome biogenesis [BR:
foh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FORMA_06310
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AOR25804
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All DBs
Position
complement(676966..677997)
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AA seq
343 aa
AA seq
DB search
MDYPLDQSEQNEELHEHYAFTVDKGQQPLRIDKYLMNFVENATRNKIQAAAKSGHIFVND
AVVKSNYKVKPHDLIRVLFEHPPHEHLLVPEDIPLDIVYEDNELLVVNKPAGMVVHPGHG
NYSGTLINALLFHFEHLPNNSSNRPGLVHRIDKDTSGLLVVAKTEQAMTHLSAQFKAKTS
KRSYTALVWGNMEEDKGTIEGHIGRHPKNRLQNTVFLGDEADKGKPAITHFEVIERLGYV
TLVRCTLETGRTHQIRVHMKHIGHTLFNDERYGGEKILKGTTFTKYKQFVDNCFKVLPRQ
ALHAETLGFIHPKTNEQMSFSCNLPSDIGDCIEKWRAYAKHAQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggactacccgctagatcaatcagagcaaaatgaagaattgcacgagcattatgctttt
accgtcgacaaagggcaacaaccgttgcgcatagataaatatttgatgaattttgtcgaa
aatgcgacaagaaataaaattcaggctgctgcaaaatcgggacatatatttgtcaatgat
gcggttgtgaaatctaactacaaggtcaagcctcatgacctcatacgggtattatttgaa
catcctccacacgaacatttattggttccagaagatattcctttggatattgtttatgaa
gataatgaactcttggttgtcaacaaacctgcggggatggtcgttcatcctggccatggt
aattattcaggcacactcatcaatgctttgctttttcattttgagcatttacccaacaat
agcagcaaccgtccaggattagttcaccgtatcgataaagacacaagtggactacttgtg
gtggccaaaacagaacaggccatgacccacctttctgctcaattcaaagccaaaacgagt
aaacgatcatatacggccttggtctggggaaatatggaagaagacaagggaactatagaa
ggccatatagggcgtcatcctaaaaacagacttcaaaatactgtttttttgggcgatgag
gccgataaaggaaagcccgccattacacattttgaagttattgagcgtttggggtatgtg
acccttgtacgctgtacactcgaaacaggacgtacccatcaaattcgtgttcatatgaag
catattggtcacaccctttttaatgatgagcgctatgggggcgaaaaaatattgaaaggc
acgacctttaccaaatacaagcaatttgtagataattgttttaaagtgcttccccgtcaa
gcgctacatgccgaaacacttggttttattcatccaaagaccaatgaacagatgtctttc
tcttgcaatctcccatcagatataggagactgtatagaaaaatggcgtgcttatgccaaa
cacgcacagtag
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