KEGG   Formosa sp. Hel3_A1_48: FORMA_10700
Entry
FORMA_10700       CDS       T04482                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
foh  Formosa sp. Hel3_A1_48
Pathway
foh03410  Base excision repair
foh03430  Mismatch repair
foh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:foh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FORMA_10700
   03430 Mismatch repair
    FORMA_10700
   03440 Homologous recombination
    FORMA_10700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:foh03400]
    FORMA_10700
DNA repair and recombination proteins [BR:foh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     FORMA_10700
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     FORMA_10700
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      FORMA_10700
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AOR26235
UniProt: A0A1D7XSD1
LinkDB
Position
complement(1121415..1123106)
AA seq 563 aa
MRWTLKPSVDEHKVQHLVDALAVDRSIAHLLVQRGIETFEEAKAFFRPKIEDLHHPFLMK
DMDKAVERIERALATNERILVYGDYDVDGTTSVALMATYLETKTDQIATYIPDRFEEGYG
VSYKGIDYAIDNDFTLIVALDCGVKAVDKVQYAKDKGVDFIICDHHRPGDKLPQAVAVLD
PKRADCTYPFKELCGCGVGFKLIHALGHNQGESLKDFLPYLDLVATAIGADIVPIVGENR
ILAYHGVRVMNASPRPGFQALIKNIKKTTLTIADVVFVIAPRINAAGRMKHGNYAVSLLK
ESNITQAELVAQEIESFNTTRRALDQNITKEALAQIEELNETECSSTVVYDSSWNKGVIG
IVASRLIEIYYRPTLVFTKSGDLLTASARSVRGFDVYEALQNCSKYIEQFGGHKYAAGLS
IKEQNFRAFKQAFENEVDKTLALHLRTPELLIDAEIQLSAVTPKFYRILKQFAPFGPQNM
APVFMTSDVVDTGYAKCVGEEDKHLKISVAQHNGEPINGIGFGLGDKLPYVANKSTFSIA
YAIDENQWNGRISLQLKLKDIKQ
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgcgctggacccttaagccttcagtagacgaacacaaagttcagcatttagtagatgca
ctagctgtagatcgctctatcgctcatcttttagtccaacgcggtatagaaacatttgag
gaggccaaggcatttttccgccccaaaattgaagacttacaccatccttttttgatgaag
gatatggataaagctgtcgaacgcattgaacgtgctttggccacaaacgaacgcatattg
gtttatggagattacgatgttgatggcactacttctgtagctttgatggcaacttacctt
gaaacaaaaacggatcaaatcgcgacctatatacccgatcgattcgaagagggatatggc
gtgtcctacaagggtattgattatgctattgataacgattttacgttaattgttgctttg
gattgtggagttaaagcggttgacaaggtacaatatgcaaaagataaaggagtagatttt
attatatgtgatcatcatcgccctggagataaattacctcaagcggttgccgtattagat
ccaaaaagagcggattgtacctatccatttaaggagctttgtggatgtggtgttggattt
aagttgattcacgctttgggccataatcaaggcgagtctcttaaagattttttaccctat
ttagatttagtagcaacggcaataggcgccgatattgttcctatagtaggcgaaaatcga
atattggcttatcacggggttcgcgtcatgaatgccagtcctcgcccaggatttcaggca
cttataaaaaatattaaaaaaactacgttgacaatagctgatgttgtttttgttattgca
ccccgtatcaatgcggcaggacgaatgaagcatggtaattatgcggtatcacttctaaaa
gaaagcaacataacccaggctgagcttgttgctcaagagattgagtctttcaacacaacc
cgtagagcattggatcaaaacatcaccaaagaggctcttgcacagattgaggaacttaat
gagaccgaatgttcatcaactgttgtttacgactcgtcttggaataaaggggtaatcgga
attgtggcttcaaggcttattgaaatctactaccgtccaacattggtattcacaaaaagc
ggagacttacttacagcttctgctcgctctgttcgtggatttgatgtttatgaagccttg
caaaactgcagtaaatatattgagcaatttggcgggcataagtatgcggcagggcttagc
attaaagagcaaaattttagagcattcaaacaagccttcgaaaacgaagtggataaaact
ttggcattgcatttaagaacaccagaattgcttatcgatgcagaaattcaactgagtgct
gttacgccaaaattttacagaattttaaaacaatttgcaccttttggaccacaaaacatg
gctcctgtttttatgacaagtgacgtggtagataccggatatgcaaaatgtgttggagaa
gaggacaaacacctcaaaattagcgtggctcaacacaatggagagcccatcaatggtatt
ggatttgggttgggggataaactgccttatgttgcaaataaaagcaccttcagtattgcc
tatgctatagatgaaaaccaatggaacggccgtatcagtctgcagttaaaactcaaagat
ataaagcaataa

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