Formosa sp. Hel3_A1_48: FORMA_11040
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Entry
FORMA_11040 CDS
T04482
Name
(GenBank) DNA recombination and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
foh
Formosa sp. Hel3_A1_48
Pathway
foh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FORMA_11040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foh03400
]
FORMA_11040
DNA repair and recombination proteins [BR:
foh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FORMA_11040
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FORMA_11040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AOR26269
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All DBs
Position
complement(1156259..1156978)
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AA seq
239 aa
AA seq
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MIISTKAIVLSKLKYKDNDLIVKCYLEAKGIVSFVVKNAFSSKKGKLKPAYFQPLSMLQV
EFDYKNSRDLHYFKNIRLLHSFQSLHTAILKSTVVIFLAEILSAVLKEEEANPSLFSYIE
TTFLWFDTIDHSSIFHHKFLMGLTKYLGFFPELNKMNLTYFNLEEGKFQAMANSPYCIHG
QKLILFNAVLGTKFDELNNHPMHATEKQDLLNMILLYFKLHLQGFKPPKSLSILNQVFN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgattatttcgacaaaggccatagtgctttcaaagctcaaatacaaagacaacgatctt
attgtcaaatgctatttggaagctaaaggcattgtaagttttgtggtaaaaaatgcgttt
tcgtctaaaaaaggaaaactcaagcctgcatattttcaacctttatcaatgttgcaagtt
gaatttgattacaaaaacagcagagatctacattattttaaaaatattcgcttactacat
tcatttcaatctctacacactgcaatattaaagtctaccgttgtgatattcttggctgaa
atattaagtgctgttctcaaggaagaggaggctaacccttcacttttttcgtatatagag
acaacatttttatggtttgatacgatagaccacagcagtatttttcaccacaagtttctt
atgggtttaacaaaatacttagggttctttcctgaattgaacaagatgaatttgacgtat
tttaatctagaagaaggaaaatttcaagccatggccaatagcccttattgtattcatggc
caaaaattaattttattcaatgcggtattaggtacgaaatttgatgaactaaataatcat
ccaatgcatgctactgaaaagcaagatctattgaatatgatattactgtattttaaatta
catttgcaagggttcaagccgccaaaatccctatctattttgaatcaggtttttaattaa
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