Formosa sp. Hel3_A1_48: FORMA_14760
Help
Entry
FORMA_14760 CDS
T04482
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
foh
Formosa sp. Hel3_A1_48
Pathway
foh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FORMA_14760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foh03019
]
FORMA_14760
03110 Chaperones and folding catalysts [BR:
foh03110
]
FORMA_14760
03029 Mitochondrial biogenesis [BR:
foh03029
]
FORMA_14760
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
foh04147
]
FORMA_14760
Enzymes [BR:
foh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FORMA_14760
Messenger RNA biogenesis [BR:
foh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FORMA_14760
Chaperones and folding catalysts [BR:
foh03110
]
Heat shock proteins
HSP60 / Chaperonin
FORMA_14760
Mitochondrial biogenesis [BR:
foh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FORMA_14760
Exosome [BR:
foh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FORMA_14760
Exosomal proteins of other body fluids (saliva and urine)
FORMA_14760
Exosomal proteins of breast cancer cells
FORMA_14760
Exosomal proteins of colorectal cancer cells
FORMA_14760
Exosomal proteins of bladder cancer cells
FORMA_14760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7367
REF
NNH2
Motif
Other DBs
NCBI-ProteinID:
AOR26632
UniProt:
A0A1D7XTK3
LinkDB
All DBs
Position
complement(1562027..1563658)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIQFDIDARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPQVTKDGVSVAKEVE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVESIVADLEKQAKKVGNSSEKIMQIASISANNDNTIGELIAKAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDSDKMIADLENPYILLFDKKISNLQEILPILEPI
AQSGRPLLIIAEDVEGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFSLENADLEMLGTAETVTIDKDNTTIVNGSGKASDIKARVNQIKSQIESTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAQKTLEKITNVNLDEVTGIQIVSRAIEAPLRTIVDNAGGEGSVVINKVLEGKGDFGYDA
KADTYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEDAPAMPPMGGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattcaatttgatatagatgcacgcgatggcctcaaaagaggggttgat
gcacttgccaatgccgtgaaagtcacgcttggccctaaaggaagaaatgtaattatcagt
aaaagctttggagcaccacaagtcacaaaagatggtgtttctgttgctaaagaggtagaa
cttgaagatgctcttgaaaatatgggcgcacagatggttaaggaagttgcctctaaaact
aatgatttggctggagatggaaccacgactgctacagttttagctcaggctatagtaaaa
gaagggctgaaaaacgtagctgccggagccaacccaatggatcttaaaagaggaatagat
aaagcagtagaatctatagtagcagatttagaaaaacaagcaaaaaaagtaggaaattca
tcagagaagatcatgcaaattgcttctatttctgcaaataatgataatactattggcgaa
ctcattgctaaagcctttggaaaggttggcaaagagggagtcatcaccgttgaagaagcc
aaaggaacagacacctatgtggatgttgttgaaggtatgcagttcgatcgtggatacctc
agtccatattttgtaactgattccgataaaatgattgccgatcttgaaaatccgtacatt
ttgttatttgataagaaaatttctaatcttcaggaaatccttccaattttggaacctatt
gcccaatctggaagaccactgcttattattgccgaggatgttgaaggtcaagccctagca
actttggtcgtaaacaagcttcgtggaggtttaaaaattgctgccgtaaaagcacctggt
tttggcgatagacgtaaggcgatgttagaagatatagcaatcttaactggtggtacagtt
atttccgaagaacgcggattctctcttgaaaatgcagatttagaaatgctaggaactgct
gaaacggtaactattgataaggacaacactacaatagtaaatggatctggaaaggcctca
gacatcaaagcgcgagtcaatcaaataaaaagccagattgaaagtactacaagtgattac
gatagagaaaagcttcaagagcgcttggctaaattagctggtggggtcgctgttctttat
gttggtgcagctagtgaagtcgaaatgaaagaaaagaaggaccgtgtagacgatgccttg
catgccacacgtgctgcagttgaagaaggtattgttgcaggtggtggcgttgcacttgtt
cgtgcacaaaaaacactagaaaaaatcactaatgttaatcttgatgaggttactggaatt
caaatagtttctagagcgatagaagcaccattacgtactattgttgacaacgctggaggc
gaaggaagcgttgttatcaacaaagttctagaaggcaaaggagattttggctacgatgcc
aaggcagatacttatgtagacatgctaaaagcaggaatcattgatccaaagaaagtaaca
cgggttgctttagaaaatgctgcatctgtagcggggatgattcttactactgaatgcgcc
ctaatagacatcaaagaagacgctcctgcaatgcccccaatgggtggcggaggaatgcct
ggaatgatgtaa
DBGET
integrated database retrieval system