Formosa sp. Hel3_A1_48: FORMA_14840
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Entry
FORMA_14840 CDS
T04482
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
foh
Formosa sp. Hel3_A1_48
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
foh03032
]
FORMA_14840
03400 DNA repair and recombination proteins [BR:
foh03400
]
FORMA_14840
Enzymes [BR:
foh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FORMA_14840
DNA replication proteins [BR:
foh03032
]
Prokaryotic type
DNA Topoisomerases
FORMA_14840
DNA repair and recombination proteins [BR:
foh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FORMA_14840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
TcaA_3rd_4th
Motif
Other DBs
NCBI-ProteinID:
AOR26640
UniProt:
A0A1D7XTY7
LinkDB
All DBs
Position
1569453..1571933
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AA seq
826 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKEFKVESSFGHIADLPSKELGVDVEGDFKPKYEVSKDK
KPLVKKLRELAKKAETVWLASDEDREGEAIAWHLAETLKLDKAKTKRIVFHEITKTAIQK
AVLNPRSIDYDLVDAQQARRVLDRIVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
EIQEFEPSASFKIDASFTTAKDQPFKARLSKPFDTLQDAKAFLELNKNADFSVSALDKKP
AKKSPAPPFTTSTLQQEAARKLYFSVSKTMNMAQRLYEAGLITYMRTDSVNLSQDARDAA
AKEIISAYGENYSKTRNFKGKSKGAQEAHEAIRPTNFSTHSVNLERDQARLYELIWKRAI
ASQMSEAQLERTNVKIATSNHDKLFTANGEVIKFDGFLKVYLEGTDDENAEQEGMLPAMA
LNEHLSNNYIIATERFSRPPYRFTEASLVKKLEELGIGRPSTYAPTISTIQNRNYVEKGS
IEGQQRQYRLLTLKANNVAEEILSENYGSDKGKLVPTDIGMIVTDFLVNHFEAILDYNFT
AKVEADFDDIASGKADWTKMMKSFYGSFHTQVEDVRENANRESGERILGTDPSTGRQLSV
RLGKFGPMAQIGKADDEEKQVFASVPPTLQLSSITFEQALDLFKLPKDLGVYDGEDVLVN
NGRFGPYVKHGKKFISLPKGVDPLSVELDEAVELINEKAKADAPIYEYEGLPVQKGKGRF
GPFIKWNNMFINVNKKYDWDNLSSEDIETLIKDKIQKEIDKIVHDWEDEGIRVEKARWGR
HNIIKGKTKIELPKSVDAAKLTLDDVKAILEKKTPKKSAKSRKKKK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaccttgtgattgtcgagtcgcctgcaaaggcaaaaacgattgagaaattt
cttggtaaagaatttaaagtggagtctagttttggacacatcgccgatttaccttccaaa
gaattgggtgtagatgttgaaggagatttcaagcctaaatatgaagtttcaaaagacaaa
aaaccgcttgttaaaaagcttagagaattggcaaaaaaggccgaaactgtttggttagct
agtgatgaggaccgcgagggagaagccattgcttggcatttggcagagaccttaaaattg
gacaaggccaaaacaaaacgcattgtttttcatgaaataacaaagacagcgattcaaaaa
gctgtcctgaacccgcgcagtatagattacgatttagtggatgctcagcaagcaagacgt
gtgttggaccgcattgtagggtacgaactttcacccgtcttatggcgtaaagtaaaagga
ggtttgtctgcaggtagagttcagtctgtctctgttcgattgattgtagaaagagaacgc
gaaatacaagaatttgaaccctcggcgagcttcaaaattgatgcttcttttaccactgcc
aaggaccaacctttcaaagcgcgcttatcaaaaccattcgatacgctgcaagacgctaaa
gcatttttggaacttaacaaaaatgcagacttttcagtatcagcattggacaaaaaaccg
gctaagaaatctccagcacccccttttacaacgtcaaccctccagcaggaagcagctaga
aaattatacttttcggttagtaagacaatgaatatggcgcaacgcttgtacgaagcaggt
ttaattacatacatgagaacggacagtgtaaatctatcacaagacgctcgagatgctgca
gccaaagaaattatttctgcttacggagaaaattacagtaaaacgcgcaacttcaaaggc
aaatccaaaggggctcaggaagctcatgaagccataaggccaacgaatttttcaacacac
tctgtcaatttagaacgcgatcaagcgcgtttgtatgagttaatttggaagcgtgcaata
gcatctcaaatgagcgaggcacaactggagcgtaccaatgttaaaattgcaacttcaaac
cacgacaagctgtttacagccaatggagaggtgataaaatttgatggatttttaaaagtc
tatcttgaaggaaccgacgatgagaacgccgaacaagagggaatgctaccagcaatggca
cttaacgagcatttgtccaataactacatcatagctactgagcgattttcacgtcctcct
tatcgttttaccgaagcctctttagtaaaaaaacttgaagaacttggtattggtcgacct
tctacttatgcgcctacgatttctaccatacagaatcgtaattatgtagaaaaaggaagt
atcgaagggcaacaaaggcaataccgtttgcttacactgaaggcgaacaatgttgcggaa
gaaatattatcagaaaactacggctctgataagggcaagttggtgccaacggatattgga
atgattgttactgattttttagtgaatcattttgaggccattttggattataatttcacc
gctaaggttgaagcagatttcgatgatattgcctcgggcaaggcagattggactaaaatg
atgaaatctttttacggatcatttcatacccaagtagaagatgtacgcgaaaacgcaaat
cgtgaatctggagagcgaattttagggacagatccatccacaggccgtcaactcagtgtt
cgtttagggaagtttggtccaatggcgcaaattggaaaagctgatgatgaggaaaaacag
gtttttgctagcgttccaccaaccttgcaattgagctccataacatttgagcaagctcta
gatttattcaaactcccaaaagatttgggtgtttatgatggtgaggacgtattggtaaat
aatggtcgatttggcccctatgtcaagcacggtaagaaatttatttctcttcccaaaggg
gttgatcctttgagtgtagaattggacgaggctgttgaattgatcaacgaaaaagctaag
gctgacgcacctatttacgaatatgaaggacttccagttcagaaaggtaaaggccgtttc
ggtcctttcataaagtggaataacatgtttattaacgtcaataaaaaatatgattgggat
aacttatcctcagaagatattgagaccttgattaaagataaaattcagaaagaaattgat
aaaatcgtacacgattgggaagacgaaggtattcgtgtggaaaaagcgcgttgggggcgc
cataatataataaaaggtaaaacaaaaattgagcttccaaaatctgtagatgctgccaaa
cttactttggatgatgttaaggctattttagaaaaaaagacgccaaaaaaatccgcaaaa
agccgtaaaaaaaagaaataa
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