Formosa sp. Hel3_A1_48: FORMA_15470
Help
Entry
FORMA_15470 CDS
T04482
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
foh
Formosa sp. Hel3_A1_48
Pathway
foh03030
DNA replication
foh03430
Mismatch repair
foh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FORMA_15470
03430 Mismatch repair
FORMA_15470
03440 Homologous recombination
FORMA_15470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
foh03032
]
FORMA_15470
03400 DNA repair and recombination proteins [BR:
foh03400
]
FORMA_15470
Enzymes [BR:
foh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FORMA_15470
DNA replication proteins [BR:
foh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FORMA_15470
DNA repair and recombination proteins [BR:
foh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FORMA_15470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Rv2179c-like
Peptidase_M9
DUF3531
Motif
Other DBs
NCBI-ProteinID:
AOR26697
LinkDB
All DBs
Position
1637776..1638552
Genome browser
AA seq
258 aa
AA seq
DB search
MQLNLKKPICFFDLETTGISITSDRIVEISILKVFPDGKEEKKTWLVNPEMPIPPQATAV
HGITNEKVGDAPTFKMLAKEIYSWIKDADLGGFNSNRFDIPILAEEMLRAEVDFDMKNTQ
SVDVQTIFHKMEQRTLTAAYKFYCGKDLQNAHSAEADTIATYEVLKAQLDRYEDLENDTS
YLAQFSTRQKFADFAGFIKFDKAGDECFAFGKHKGQKVTEILNKEPGYFGWLLNADFPLY
TKKVLTAIKLRAFNQKLS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgaatcttaaaaaacctatttgtttctttgatttagaaactacaggaatcagt
attacttccgatagaattgttgaaatttcaattttgaaagtcttcccagatggaaaagaa
gaaaagaaaacatggttggttaatcctgagatgccaattccccctcaggctacagcagta
catggtataaccaacgaaaaagtaggtgacgcccccacatttaaaatgcttgctaaagag
atttattcttggattaaagatgctgatttaggaggttttaattccaaccgttttgacatt
ccaattcttgccgaagaaatgcttcgcgctgaagttgatttcgatatgaaaaatacacaa
tcagtagatgttcaaacaatttttcataaaatggaacaacgcaccctcacagcagcctac
aagttttattgtggtaaagatctacaaaatgcccacagcgctgaggccgatactattgca
acgtatgaagtgctcaaagctcaattggatcggtatgaagatttagaaaacgatacttca
tatctagcacaattcagtacgcgtcaaaagtttgccgattttgcaggtttcataaagttc
gataaagcaggtgatgaatgttttgcatttggaaaacacaaaggtcaaaaagtgactgag
attttaaataaggagcccggatattttggttggctactcaatgcagactttccattatat
actaaaaaggttttgaccgccattaaactgcgggcttttaatcagaaactgtcttag
DBGET
integrated database retrieval system
