Formosa sp. Hel3_A1_48: FORMA_17640
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Entry
FORMA_17640 CDS
T04482
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
foh
Formosa sp. Hel3_A1_48
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foh03400
]
FORMA_17640
Enzymes [BR:
foh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FORMA_17640
DNA repair and recombination proteins [BR:
foh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FORMA_17640
Prokaryotic type
FORMA_17640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOR26913
UniProt:
A0A1D7XUA5
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All DBs
Position
complement(1865761..1867062)
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AA seq
433 aa
AA seq
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MSPTAIFWYRRDLRLNDVHGLYQALKQHESVLLIFIFDPEILDCLPKDDARVDFIYHRLK
DLNIALSKHRTAIHTFYASPKEVFTSIIKQHNIKAVYTNHDYEPYAIKRDAEIEALLNDQ
KITFTSYKDQVIFEKNEVTKDDGLPYKVYTPYSKKWLSLFDDKQTQAYPSEEFLDNAAKL
EVRQWVDKKDMGFVSSKRKIVPYKIEDELIDAYEEKRNTPSVDGTSRLGPHLRFGTVSIR
SIVKKSRKSQNITFLKELIWREFFMQILWHFPHTIAKSFKPQYEAIKWRNNKEEFQMWCQ
GKTGYPLVDAGMRELNQTGFMHNRVRMLVGSFLCKHLLIDWRWGEAYFAEKLHDFELSSN
VSNWQWVAGCGVDAAPYFRIFNPTTQITKFDKDHLYIKKWVPEYQEFSYPKPIVDHKFAR
ERCLVTYKKALNR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctacagcaattttttggtatagaagagatctaagacttaatgatgttcatggc
ttatatcaagcgctaaaacagcacgagagtgttcttcttatattcatatttgaccctgaa
attttagattgtttaccaaaggatgatgcccgtgttgattttatataccatcgactaaaa
gacctaaatattgcgcttagtaaacatcggacagcaattcatacattttatgcaagccca
aaggaagtatttacttcaataataaaacaacacaacatcaaggcggtgtataccaatcac
gactacgagccttatgccattaaaagagatgcggaaattgaagcactgttaaatgatcaa
aaaatcacatttacatcatacaaagaccaagttatttttgaaaagaatgaagtcacaaaa
gatgacggtttaccctataaagtttatactccctattcaaagaaatggttgagcttattc
gacgataagcaaacacaagcttatccgtctgaggaatttttagacaatgcggcaaaatta
gaagtacgtcaatgggtagataagaaagatatgggctttgtttcatcaaaaagaaaaatt
gtaccgtacaaaattgaagatgaattgatagatgcatacgaagagaaaagaaatacaccc
tcagtagatggaacatcccgactaggtccccatttgcgctttggaacggtaagtattaga
agtattgtgaaaaaatcgagaaaaagtcaaaatattacatttttaaaagagcttatttgg
cgcgagttttttatgcaaatcttatggcactttccccatacaatcgcaaaaagttttaag
ccgcaatacgaagcaataaaatggcgtaacaataaagaagagtttcaaatgtggtgccag
ggtaaaacaggttatccgctagttgatgctggaatgcgcgaattgaatcaaacaggattt
atgcacaacagggttcgcatgcttgttggtagttttttatgtaaacacttactcattgat
tggcgatggggtgaagcttactttgctgaaaagttacatgattttgagctatccagcaat
gtgagtaactggcaatgggtagcgggttgtggagttgatgcagcaccctattttagaata
tttaaccctacaacacaaatcactaaatttgataaagatcatctttacatcaaaaaatgg
gttcctgaatatcaagaattttcctatcctaaacctatagtcgatcataaatttgctcga
gaacgttgtttagtaacctacaaaaaagcattgaacagataa
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