Formosa sp. Hel3_A1_48: FORMA_17810
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Entry
FORMA_17810 CDS
T04482
Name
(GenBank) ribosomal large subunit pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
foh
Formosa sp. Hel3_A1_48
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foh03009
]
FORMA_17810
Enzymes [BR:
foh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FORMA_17810
Ribosome biogenesis [BR:
foh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FORMA_17810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Glycoprotein_G
Motif
Other DBs
NCBI-ProteinID:
AOR26930
LinkDB
All DBs
Position
complement(1879789..1880454)
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AA seq
221 aa
AA seq
DB search
MYEDNHIIAINKRVGDIVQGDKTNDPPLSELVKIYLKYKYNKPGAVFLGVVHRLDRPTSG
VVIFAKTSKALKRMNQLFQDKKIDKTYWAIVKKRPVKSKESLTHWLKKNPKTNTTKVYPK
EVQDSKKAILHYKTLLKLDNYTLLEVKLETGRSHQIRSQMAYIGCPIKGDLKYGFQRSNA
DGGIHLHAKAIQFTHPVSKTPIYINAVPPDDVLWNECTKMI
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
ttgtatgaagacaaccacattatagccatcaacaagagagttggagatattgttcaaggg
gataaaaccaatgacccaccgctatcagaattagtcaaaatctatttaaagtacaaatac
aataaacccggagctgtatttttaggagttgtacaccggctagatcggccgacatcggga
gttgtaatttttgcaaaaacttcaaaagcactcaagcggatgaatcaattgtttcaagac
aaaaaaattgataaaacctattgggctatagtaaaaaaaagaccagttaaatcaaaagag
agtttaacacattggttgaaaaaaaatccaaaaaccaacaccacaaaagtgtacccaaaa
gaagttcaagacagtaaaaaagctattttgcactacaaaacacttttaaaattggacaac
tatacactattggaagtgaaattagaaacaggaagatctcatcaaattagaagtcaaatg
gcgtatattggttgcccaataaaaggggatttaaagtatggttttcagcgaagtaatgct
gatggaggaattcacttacatgccaaagctattcaatttacacacccggtatccaaaacc
cccatctacataaatgcagtgccaccagatgatgttttatggaacgagtgtactaaaatg
atttaa
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