Formosa sp. Hel3_A1_48: FORMA_18530
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Entry
FORMA_18530 CDS
T04482
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
foh
Formosa sp. Hel3_A1_48
Pathway
foh03030
DNA replication
foh03430
Mismatch repair
foh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FORMA_18530
03430 Mismatch repair
FORMA_18530
03440 Homologous recombination
FORMA_18530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
foh03032
]
FORMA_18530
03400 DNA repair and recombination proteins [BR:
foh03400
]
FORMA_18530
Enzymes [BR:
foh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FORMA_18530
DNA replication proteins [BR:
foh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FORMA_18530
DNA repair and recombination proteins [BR:
foh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FORMA_18530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
DNA_pol3_gamma3
AAA_22
AAA_14
AAA_5
AAA_24
AAA_30
Rad17
RCF1-5-like_lid
TIP49
Sigma54_activ_2
Mg_chelatase
DNA_pol3_delta_C
AAA_19
DnaX_C
nSTAND3
AAA_16
AAA_assoc_2
AAA_18
AAA_2
DUF7486
AAA_7
DUF815
RNA_helicase
NPHP3_N
TsaE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AOR27001
UniProt:
A0A1D7XUJ3
LinkDB
All DBs
Position
complement(1954469..1956190)
Genome browser
AA seq
573 aa
AA seq
DB search
MENFVVSALKYRPKTFKDVVGQSAITQTLENAIKENHLAQALLFTGPRGVGKTSCARILA
KMINSNGSVDENEDYAFNIFELDAASNNSVDDIRNLTDQVRIPPQVGSYKVYIIDEVHML
SSNAFNAFLKTLEEPPKHCIFILATTEKHKIIPTILSRCQIFDFKRITVTDAKNYLKVVA
KAQNIEAEDDALHIIAQKADGAMRDALSIFDRVVSFSGKNLTRKAVSENLNVLDYETFFK
ITDLILDNAIPSLLIQFNQILARGFEGQHFIAGLASHFRDLYVAKSTETLELLEVGADTK
ERYKLQSERTSPTFLKEAISLANDCDLKYKTSRNQRLLVELCLMKLASINFDGEKKKSEG
FIIPASFFKDKNLSESKTESDQNIPQTNSVNSSTELPSVEEPETKYNPPKIEAPVIKGIK
RQASGLSLKSIQQKKAHQIKQMDVEIKEEDLPSDSFTQDQLNEYWDTFVDKLEKKGKYNL
AAILKIDTPKLTDDDVIQLEFPNSTNKIEVERNQFDLLQFLRKSLNNFNIRLEISVNEAL
DKKYAYTSEDKYAKLLKKNPALETLKQTFNLDL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttcgttgtatctgccttaaaatatagaccaaaaacatttaaagatgtcgtt
ggtcaatctgctattacccagacacttgaaaatgcaataaaagaaaaccatttggcccaa
gcactgctttttacaggccctcgtggcgtgggtaaaacatcttgtgcccgcatacttgct
aaaatgattaacagcaatggttctgtcgatgaaaatgaggactacgcattcaatattttt
gaacttgatgctgcatccaacaactctgttgatgacataagaaacctaaccgatcaagtt
cgcataccaccacaagtcggaagctataaagtttatattattgatgaagttcatatgctg
tcctctaatgcttttaatgcatttctaaaaacattagaagagccaccaaaacactgcatt
tttatattagcaacaaccgaaaagcataaaattattccaacaattctttcacgttgtcaa
atatttgatttcaaacggataacagtaacggatgctaaaaactatttaaaagttgtcgct
aaagcacaaaatattgaagctgaagatgatgcattgcatatcatcgcccaaaaagctgat
ggcgcaatgcgtgatgcactctctatatttgacagagtagtaagtttttcagggaaaaat
cttacgcgaaaagcagtttccgaaaatctaaatgtactcgattatgaaacttttttcaag
attactgatctaatattagacaacgctatcccatctttactaattcaatttaatcaaatt
ttagctagaggctttgaaggtcagcattttattgcaggtttagcttcacacttcagagat
ctttatgttgcaaaatcaacagaaacactagagcttttagaggttggtgcagatacaaaa
gagcgctacaagcttcaatcagaacgtacaagccccacattcctcaaggaagctatttct
cttgccaatgattgtgacctaaagtacaaaacgagtagaaatcaacggcttttagtagaa
ctttgcttaatgaaactagcctctatcaattttgatggagaaaaaaaaaagtctgagggc
ttcataatacctgcctctttttttaaggataagaatctttctgaatctaagactgaatcg
gaccaaaatattcctcagacaaattctgttaattcttctacagaactaccctctgttgaa
gaacccgaaacgaagtataatccaccaaaaattgaagcgccagtcataaaaggaatcaaa
agacaggcttcgggcttatcgctaaaaagtatacagcagaaaaaggcacatcagatcaaa
caaatggatgttgagattaaagaagaagatcttccctccgattcttttactcaagaccaa
ttaaatgaatattgggatacttttgtggataagcttgaaaaaaaaggaaaatataacctc
gctgcaatacttaaaattgacacgccaaaactaacagatgatgatgtgattcagttagaa
tttcctaattcaacaaataaaattgaagtagaacgaaaccaatttgatctattacaattc
ttacgcaaatctttaaacaattttaatatacgcttggaaattagtgtaaatgaagccttg
gataaaaaatatgcgtacacatctgaagataaatacgcaaagcttttgaaaaaaaaccca
gcattagaaacattaaaacaaacgtttaacttagatttatag
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