Formosa sp. Hel3_A1_48: FORMA_18890
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Entry
FORMA_18890 CDS
T04482
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
foh
Formosa sp. Hel3_A1_48
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
foh03016
]
FORMA_18890
Enzymes [BR:
foh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FORMA_18890
Transfer RNA biogenesis [BR:
foh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FORMA_18890
Prokaryotic type
FORMA_18890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AOR27037
UniProt:
A0A1D7XUM5
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All DBs
Position
1990599..1991381
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AA seq
260 aa
AA seq
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MFQKRFYYLVRFQFLGYRFHGWQKQPNTKTLHLMIDRTLKYVLKDQYFKTLAASRTDAKV
SAEEAAFELFLKDKPLDDLELFMAEFNANLPQDIRALSIDEVTSDFNIIQDSKYKEYHYI
FSQGEKCHPFCAPIMTTILEPLNISMMIKGAALFKGKHNFKSYCYKATDKGLYERELLCC
ELLENKLYTANFFPEKSYILRVIGKGFGRHQIRLMMGALIKLGRGEVDLEYITKSLTKEF
EGNIDYIAPASGLILHKINF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaagcgcttttactacctagtcagatttcaatttttgggctatcgttttcat
gggtggcaaaaacaaccaaataccaaaactctgcacctgatgattgaccgaacattgaag
tatgttcttaaagatcaatattttaaaaccttagccgccagtcgaacagatgctaaagtt
tctgcagaagaagccgcttttgaactctttcttaaagataagcctctagatgatttagaa
ttatttatggcagaatttaatgcaaatttgcctcaagacataagagcgctatctatcgat
gaagttacatctgactttaacatcattcaagattcaaaatacaaggagtatcattatatt
ttttctcaaggggagaagtgccatccattttgtgcccccataatgactacaattttggaa
cctttaaatatttcaatgatgattaaaggcgcagctctttttaaagggaagcacaatttt
aaatcctactgctacaaggccactgataaaggattgtatgaacgcgagttgctgtgctgt
gagcttttggaaaataagctctacaccgcaaatttttttcccgaaaagagctatatcttg
cgcgtaataggtaaggggtttggacgacaccaaattcgcttgatgatgggggctttgatt
aaacttggtcggggtgaagtagatttagagtacataaccaaaagcttaacaaaagagttt
gagggtaatattgattacattgcgcctgcatcagggcttattttacacaaaataaatttt
taa
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