Flavobacterium okayamense: KK2020170_08440
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Entry
KK2020170_08440 CDS
T09418
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fok
Flavobacterium okayamense
Brite
KEGG Orthology (KO) [BR:
fok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fok03400
]
KK2020170_08440 (radA)
DNA repair and recombination proteins [BR:
fok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KK2020170_08440 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
AAA
Zn_ribbon_LapB
DUF7125
Lon_C
AAA_22
AAA_5
AAA_24
Rad51
CobU
AAA_16
TniB
AAA_14
RsgA_GTPase
nSTAND_NTPase5
ABC_tran
NTPase_1
AAA_18
DZR
Isochorismatase
NACHT
nSTAND3
W_rich_C
Motif
Other DBs
NCBI-ProteinID:
BCY27976
UniProt:
A0ABM7S325
LinkDB
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Position
complement(931023..932384)
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AA seq
453 aa
AA seq
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MSKIKTSFFCQNCGTSYSKWQGQCYTCKEWNTIAEEIIQKEEKVAWKNSEKETSKAAKPL
RIKEIDSSQEIRLNTTDNELNRVLGGGLVPGSLTLLGGEPGIGKSTLLLQISLKLPYKTL
YVSGEESMKQIKMRAERIIPNSENCYILTETKTQNIFRQISEMQPEIVIIDSIQTLHTDY
IESSAGSISQIRECTAELIKFAKETNTPVILIGHITKDGTIAGPKILEHMVDTVLQFEGD
RNHVYRILRSLKNRFGSTAELGIYEMLGNGLREVENPSEILISHKEEELSGTAIACTLEG
MRPLMIEIQALVSSAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGTKDVFLNVTGGI
SVDDTAIDLAVVAAILSSNEDIAIEEGFCFAGEVGLSGEIRPVNRIDQRIQEAEKLGFTT
ILVSKHNKISLKNTKIKVVLVSKIEDVVSELFG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaataaaaacttcctttttttgtcaaaattgtggcacatcctattctaaatgg
caaggacaatgttacacttgcaaagaatggaatactattgctgaagaaattattcaaaaa
gaagaaaaagtagcttggaagaattctgaaaaagaaacttctaaagcagctaaacctttg
cgcataaaagaaatagattcttctcaagaaatcagacttaatactaccgataatgaatta
aatcgtgttcttggaggtggattggttcctggttcgttaacacttttaggtggcgaacct
ggtattggaaaaagtacgcttttacttcaaatttctttaaaattaccttacaaaacatta
tatgtttcgggtgaagaaagcatgaagcaaattaaaatgcgtgccgaacgcattattcca
aatagtgaaaattgctacattctaaccgaaaccaaaacacaaaacattttcagacaaatt
tctgaaatgcaacctgaaattgtcattattgattcgattcaaacgttacatactgattac
attgagtcgtcagccggaagcatctctcaaattagagaatgtactgccgaattaatcaag
tttgcgaaagaaactaatactccagttatcttaattgggcatattacaaaagatggaact
atagcaggaccaaaaattctagaacacatggtcgatactgttcttcagtttgaaggagat
agaaatcatgtatacagaattttacgttcactcaaaaatcgtttcggctcaactgccgaa
ttaggaatttacgagatgcttggtaacggattacgagaagttgaaaatccgtcagaaata
ctaatttctcataaagaagaagaactttcaggaactgcgatagcttgtacattagaaggt
atgcgacctctcatgatagaaattcaagcgttagttagttctgccgtttacggaacacct
caacgaagcacaacaggctataatgcgaaacgattaaacatgattttagccgttttagaa
aaacgcgctggtttccgtttaggcacaaaagatgttttcctaaatgttaccggcggaatt
tcagttgacgatacagcaatagatttagcagttgttgctgctattttatcttcaaatgaa
gacattgccattgaagaaggcttttgttttgctggagaggttggcttatcaggagaaatt
cgtcctgtaaatagaattgaccaacgcattcaagaagctgaaaaattaggcttcaccaca
attttggtttctaaacacaataaaatttcacttaaaaacactaaaattaaagtcgttttg
gtttctaaaattgaagacgtagtttctgaattatttggataa
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