Flavobacterium okayamense: KK2020170_08820
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Entry
KK2020170_08820 CDS
T09418
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
fok
Flavobacterium okayamense
Pathway
fok02020
Two-component system
fok02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KK2020170_08820 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KK2020170_08820 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fok03021
]
KK2020170_08820 (rpoN)
Transcription machinery [BR:
fok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KK2020170_08820 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
HTH_Crp_2
MarR
SHNi-TPR
Crp
Motif
Other DBs
NCBI-ProteinID:
BCY28014
LinkDB
All DBs
Position
complement(975517..976980)
Genome browser
AA seq
487 aa
AA seq
DB search
MLKQNLQLKLSQKLSPQQIQLMKLIQLPTQAFEQRLQEEMVENPALESGKEDNVDFDEYA
DNSNDDFDDYDNEHIDTDDINIDEYLSNDETPDYKYQTNNYSDDDDDKSMPFVAGVTFHQ
DLLNQLNTFVLDDTERDVAEFIVGSIDDTGYIRRTIQDMVDDMAFTQGIYTDENTVERIL
KHVVQELEPAGVAARDLQECLLLQLKHKTPTDSIELAISIIDDQFDAFTKKHYEKLLQKF
DITKEQLRKAIEEIEKLNPKPGSSFSGNQKPIEHVVPDFTIRIVEGELDLILNGRNAPEL
HVSKDYQEMLQSYKDSSDKSAQKDAVQFIKQKLDSAKWFIDAIKQRQETLFVTMNAIMHY
QEEYFLDGDETKLKPMILKDIADMVGLDISTVSRVANSKYVDTPYGTKLIKDFFSEAMKN
TEGEDVSTIEIKKILQNVIEEEDKRKPLPDDKLAEILKDKGYPIARRTVAKYREQLDIPV
ARLRKKI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaaaatctacaattaaaactttctcaaaaattatcgcctcaacaaatacag
ttgatgaagttaattcaattgcccacacaagcatttgaacaacgtttacaagaagaaatg
gttgaaaatccagctctagaaagcggtaaagaagataatgtagacttcgatgagtatgct
gacaactcaaatgatgatttcgacgattacgataacgaacatatagacactgatgacatc
aatattgatgaatatttaagtaacgacgaaactcccgattacaaataccaaacaaataat
tacagtgatgatgatgatgacaaaagtatgccatttgttgctggcgttacctttcatcaa
gacttactaaatcaacttaacacttttgttttagacgatacagaaagagacgtagctgaa
tttatcgttggtagtatagatgacactggttatatccgtagaacgatacaagatatggta
gacgacatggcatttactcaaggtatttatactgatgaaaatacggttgaacgaattcta
aaacatgttgttcaagaattagaacctgctggagtagctgctagagatttacaagaatgt
ttgcttttacaattgaagcataaaactccaactgattctattgaattggccatttctatc
atagacgatcagtttgatgcttttactaaaaaacattacgaaaaattattgcaaaaattt
gacatcacgaaagaacaattacgaaaagcaatagaggaaattgaaaaattaaatccgaag
cctggaagtagttttagtggtaatcaaaagccaatcgaacatgtagttcctgactttaca
atccgaattgttgaaggggaattagatttgatattgaatggaagaaatgctccagaatta
catgtttctaaagattatcaagaaatgcttcagagctataaagattcttctgacaaatcg
gctcaaaaagatgctgtgcaattcatcaaacaaaagttagattctgcaaaatggttcatc
gatgctattaagcaacgccaggagactctttttgttacaatgaatgccattatgcattat
caagaagaatatttcttagatggtgatgaaacaaagttaaaaccaatgattttgaaagat
attgctgatatggtaggccttgatatttcaacggtttcgcgtgttgctaatagcaaatat
gttgacacaccttatggcacaaaattaattaaggatttctttagtgaagccatgaaaaac
actgaaggagaagatgtttctacaatagagattaaaaaaatacttcaaaatgtaattgaa
gaggaagacaaaagaaaacctttacctgatgataaattagctgaaatattaaaagataaa
ggctatccaattgccagaagaacagttgcaaaatatcgcgaacaattagatattccagta
gcgagattacgtaagaaaatttaa
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integrated database retrieval system
