Flavobacterium okayamense: KK2020170_10050
Help
Entry
KK2020170_10050 CDS
T09418
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fok
Flavobacterium okayamense
Pathway
fok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KK2020170_10050 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fok03400
]
KK2020170_10050 (ruvB)
Enzymes [BR:
fok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KK2020170_10050 (ruvB)
DNA repair and recombination proteins [BR:
fok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KK2020170_10050 (ruvB)
RecFOR pathway proteins
KK2020170_10050 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_22
AAA_5
Mg_chelatase
AAA_3
Rad17
nSTAND3
AAA_14
AAA_16
AAA_18
TIP49
RNA_helicase
AAA_28
TsaE
AAA_33
NB-ARC
AAA_17
AAA_PrkA
ABC_tran
AAA_24
NACHT
NPHP3_N
Torsin
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
BCY28137
LinkDB
All DBs
Position
1106517..1107539
Genome browser
AA seq
340 aa
AA seq
DB search
MNENLNPNKDNFSQQDIDIEKALRPLSFDDFAGQEQVLENLKIFVQAANLRDEALDHTLF
HGPPGLGKTTLANILANELGVGIKITSGPVLDKPGDLAGLLTNLEDRDILFIDEIHRLSP
VVEEYLYSAMEDYKIDIMIESGPNARTVQINLNPFTLVGATTRSGLLTAPMRARFGIQSR
LQYYNKELLSTIVERSASILNVPIDFEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGNG
RIDIEISQFALKSLNVDAHGLDEMDNKILTTIIDKFKGGPVGLTTLATAVSESGETIEEV
YEPFLIQEGFIVRTPRGREVTELAYKHLGRMKSGNQGELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaatctaaatccaaataaagataatttttctcagcaagatatagacattgaa
aaggctttacgaccgctttcatttgatgactttgctggtcaagaacaagttttagaaaac
ttgaagatttttgttcaagcggcaaatctaagagacgaagctttggatcatacattgttc
catggtccgccaggtttaggaaaaactactctagcaaatattttagctaatgaacttggc
gttggaataaaaatcacttctggtccagttctagataaacctggtgacttagctggtttg
ttgacaaatttagaagatagagatattttatttattgatgaaattcatcgcttaagtcca
gttgttgaagaatatttgtattcagcaatggaagattataaaattgatattatgattgaa
tctgggccaaatgcaagaacagtacaaattaatttaaatcctttcacccttgttggtgct
actacccgttctggtcttcttacagcgcccatgcgtgcgcgttttgggattcaaagtaga
ttacaatactataataaagaattactttctactattgtagaaagaagcgcatcaatttta
aatgttcctattgattttgaagctgcaatagagatagctggaagaagtagagggacgcct
cgtattgccaatgcattattgcgtagagttagagattttgcgcaaattaaaggtaatggt
agaatagatattgaaatttctcaatttgcattaaagtctttaaatgttgatgctcatgga
ttagatgaaatggataataagattctaaccactatcattgataagtttaaagggggtcct
gtaggtttaacaacattagcaactgcggtttctgaaagtggagaaactattgaagaagtt
tacgagccatttttaattcaagaaggatttattgttagaacgcctagaggaagagaagta
acagagttagcttataagcatcttggtagaatgaaatctggtaatcaaggagaattgttt
taa
DBGET
integrated database retrieval system
