Flavobacterium okayamense: KK2020170_10910
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Entry
KK2020170_10910 CDS
T09418
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fok
Flavobacterium okayamense
Brite
KEGG Orthology (KO) [BR:
fok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fok03400
]
KK2020170_10910
DNA repair and recombination proteins [BR:
fok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
KK2020170_10910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA
AAA_16
TrwB_AAD_bind
AAA_10
ResIII
FtsK_SpoIIIE
Zot
AAA_30
AAA_7
AAA_19
SLFN-g3_helicase
T2SSE
Hydrolase
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
BCY28223
LinkDB
All DBs
Position
complement(1210059..1211591)
Genome browser
AA seq
510 aa
AA seq
DB search
MNRKEDFSNQINEGYTFKGDFITIGGAILDNEVLPNTYVNIPLKTLNRHGLIAGATGTGK
TKTIQVLSEQLSLKGIPVLMMDIKGDFSGIAQPGEEKSFITERHQKIGLEYQTKGFPVEL
MTISEQNGVRLRATISEFGPVFFSRILDLNDTQSGVVSVVFKYCDDNSIPLLDIKDFKKV
LQYITEEGKAEFTSDYGRISTASTGAIFRKVIELEQQGGDLFFGEKSFEIDDLMRFDENG
NGYVNVIRLTDLQDKPKLFSTFMLSLLAEIYNTMPEKGDAEQPELVIFIDEAHLIFDQAS
KALLDQIETIVKLIRSKGIGVFFITQNPMDVPSSVLAQLGLKIQHALRAFTANDRKAIKM
SAENYPISEYYKTDEVLTSLGIGEAFVTVLNEKGIPTPLVATMLRAPMSRMDILNPAEIS
ESISKSKLAKKYNEVIDRESAYEILTKKIEQAQVIATKEEEKKQKEKEAKKNTRTSSSTS
NTVTKGIVKMLTSATFIRGAMGLLLKMMKK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaaagaagacttttcaaatcaaataaatgaaggttatacttttaaaggagat
tttataacaattggtggtgcaattttagataacgaagttttgccaaacacatatgtaaat
attcctttaaaaactttaaaccgacacggcttaattgctggagcaacaggaacgggaaaa
acaaagacaattcaagtgttatcggaacagctttctttaaaaggaattccggttttaatg
atggacattaaaggtgatttttctggaattgcacaacctggagaagaaaaatcgtttatt
acagagcgtcatcagaaaattggtttagaataccaaactaaaggtttccctgttgaatta
atgacgatttcagaacaaaatggagttcgtcttcgtgctactatttcagaatttggtccg
gtttttttttcaagaattttagatttaaacgatacacaatcgggcgttgtttcggttgtt
tttaaatattgtgatgacaatagcattccgcttttggatattaaagacttcaaaaaggta
ctacaatatattaccgaagaaggtaaagcagaatttacttccgattatggaagaatttca
accgcttcaactggagcaatttttagaaaagttattgaattagaacagcaaggtggcgat
ttgttttttggcgaaaaatcatttgaaattgatgatttaatgcgttttgacgaaaacgga
aatggttacgtaaatgtaatacgcttaaccgatcttcaagataagccaaagttattttca
acttttatgttgagtttattagccgaaatctataatacgatgcctgaaaaaggcgatgcc
gaacaacctgaattagtaatctttattgatgaggctcatttaatttttgaccaagcgagt
aaagctttattagatcaaattgaaaccattgtaaaattaattcgttcaaaaggaattggc
gttttttttattacacaaaaccccatggatgttcctagtagtgttttagcgcaattaggt
ttaaaaattcaacatgcattacgtgcttttactgcaaacgatagaaaagctataaagatg
agtgctgaaaattatccaatttcagaatattataaaactgatgaagttttaacttcgtta
ggaattggtgaagcatttgttaccgttttaaatgaaaaaggaattccaacaccattggtt
gctactatgcttagagctccaatgagccgaatggatattttaaatccagcagaaatttcg
gaaagcatatctaaatcgaaattggctaaaaaatacaatgaagtgattgacagagaaagt
gcttatgaaattttaaccaaaaaaattgagcaagcacaagttattgctaccaaagaagaa
gaaaagaaacaaaaagaaaaagaagctaaaaaaaatacgagaacctcaagttcaacttcc
aatacggtaacaaaaggaattgtaaaaatgttgacaagtgctacatttattcgtggtgct
atgggattattattaaaaatgatgaaaaagtaa
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