Flavobacterium okayamense: KK2020170_18630
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Entry
KK2020170_18630 CDS
T09418
Symbol
phrB1
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fok
Flavobacterium okayamense
Brite
KEGG Orthology (KO) [BR:
fok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fok03400
]
KK2020170_18630 (phrB1)
Enzymes [BR:
fok01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KK2020170_18630 (phrB1)
DNA repair and recombination proteins [BR:
fok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KK2020170_18630 (phrB1)
Prokaryotic type
KK2020170_18630 (phrB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BCY28995
UniProt:
A0ABN6HX90
LinkDB
All DBs
Position
complement(2038637..2039926)
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AA seq
429 aa
AA seq
DB search
MTIFLFRRDLRLHDNAALFHALNSSKEVLPIFIFDTSILEQLPKDDARVSFIHESLEDIQ
NQLNKKGKSLAVFNGTPYEIFKNLISENDIETVYTNHDYEPYARKRDKEINTLLKAHNIA
FKTAKDQVIFEKSEVVKDDNSPYVVYTPFSKKWKENFSTSLLKNYPSEELLENITNHNYP
FLKLTDINFEKTNIQLPKYNVSDQLIDNYQETRNFPAIDGTSHLGIHLRFGTVSIRKMVK
KALESKNETFLNELIWREFFMQILWHFPHTINESFKPKYDNIKWLNDEKNFKKWCEGKTG
YPFVDAGMRELNTTGHMHNRVRMIVASFLCKHLLIDWRWGETYFAQKLLDYEQASNIGNW
QWAAGSGVDAAPYFRIFNPSEQIKKFDKDLKYIKKWIPELETSKYPEPIVDHKEARERCL
KVYKEALDV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttttttgttccgtcgcgatttacgtttgcatgataatgcagcattgtttcat
gcactaaattcttctaaagaagtattacctatttttatatttgatacttcaattttagaa
caacttccaaaagatgatgctcgcgttagttttatacatgaaagtttagaagatatacag
aatcaattaaataaaaaaggtaaatcattagctgtttttaatggaactccatatgaaata
ttcaaaaatttaatttctgaaaatgacattgaaactgtttatacaaatcatgattatgaa
ccctacgctagaaaacgagataaagaaataaatactttattaaaagctcataatattgca
ttcaaaacggcgaaagaccaagttatttttgaaaaaagtgaagttgttaaagatgataat
tccccatatgtagtttatactcctttttcaaaaaaatggaaagaaaatttttctactagt
cttttaaaaaactatccttccgaagaattattagaaaatattacaaatcataattatcct
tttttaaaattaaccgatatcaattttgaaaaaacaaacattcagttaccaaaatataat
gtatctgatcagttaatcgataattatcaagaaaccagaaactttccagcaattgacgga
acgtctcacttaggaattcatctacgatttggtacagtttctattcgaaaaatggttaaa
aaagcattagagtcaaaaaatgaaacatttttaaatgaattgatttggagagaatttttt
atgcaaattctttggcattttcctcatactataaatgaaagttttaaaccaaaatatgat
aacataaaatggttgaacgatgaaaaaaactttaaaaaatggtgtgaaggaaaaacaggt
tatccctttgtagatgcaggaatgcgtgaattgaatactactggacacatgcataataga
gtacgcatgattgtggcaagttttttatgcaaacacttactcatagattggagatggggc
gaaacttattttgctcaaaaattgcttgactatgaacaagcgagtaatataggaaattgg
caatgggcagcgggttcaggtgttgatgcagcaccctattttcgaatttttaatccatcg
gaacaaattaaaaagtttgataaagatttgaaatatattaaaaaatggattcctgaatta
gaaacttctaaatatcctgaacctatagtagaccataaagaagcaagagaaagatgttta
aaagtttataaagaagcgctagatgtatga
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