Flavobacterium okayamense: KK2020170_20500
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Entry
KK2020170_20500 CDS
T09418
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fok
Flavobacterium okayamense
Brite
KEGG Orthology (KO) [BR:
fok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fok03032
]
KK2020170_20500 (gyrA)
03400 DNA repair and recombination proteins [BR:
fok03400
]
KK2020170_20500 (gyrA)
Enzymes [BR:
fok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KK2020170_20500 (gyrA)
DNA replication proteins [BR:
fok03032
]
Prokaryotic type
DNA Topoisomerases
KK2020170_20500 (gyrA)
DNA repair and recombination proteins [BR:
fok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KK2020170_20500 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF6887
Motif
Other DBs
NCBI-ProteinID:
BCY29182
UniProt:
A0ABM7S6N5
LinkDB
All DBs
Position
complement(2228038..2230581)
Genome browser
AA seq
847 aa
AA seq
DB search
MSEGEKLIPINIEDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLFGMHELGIRSNS
AYKKSARIVGEVLGKYHPHGDSSVYDTMVRMAQEWSLRYLMVDGQGNFGSIDGDSPAAMR
YTEARMKKISEEMLADIEKETVDFQLNFDDSLEEPKVLPTRVPNLLINGASGIAVGMATN
MPPHNLTEVIDGTLAYIDNNDIEIDELINHVKAPDFPTGGIIYGYEGVREAFKTGRGRIV
MRAKAGFEESNGREAIIVTEIPYQVNKADMIKKTADLVNDKKIEGISTIRDESDRNGMRI
VYELKRDAVPNVVLNTLYKYTQLQSSFSVNNIALVNGRPQLLNLKELIHYFVEHRHDVVT
RRAQFDLRKAEERAHILEGLIIASDNIDEVIALIRSSKDGEEARGKLMERFKLSEIQARA
IVEMRLRQLTGLEQDKLRAEYDEIMKLITYLKELLANKEMRMQVIKDELAEIRDKYGDGR
RSQIEYAGGDVSIEDLIADESVVITISHAGYIKRTSLSEYKTQNRGGVGQKSAATRDQDF
LEHLFVATNHQYLMFFTQKGKCFWMRVFEIPEGTKASKGRAIQNIINIEPDDKVKAFICT
QDLKDEEYVNNHFVIMATKQGQVKKTPLEQYSRPRQNGINAITIKEDDELLEAKLTTGNS
QVLLAVKSGKLVRFEEEKTRPMGRTASGVRGITLADEKDEVIGMISIDRDKVNESQILVV
TENGYGKRTLLVDEDGEDVYRITNRGGKGVKTLNITEKTGQLIAINAVTDDDDLMIINKS
GLTIRMRVDDLRVMGRATQGVRLINIKGTDSIAAVTKVLREDESEEILEGEENTPEIDST
ENNETQE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggagaaaagttaattcctattaacattgaagatgaaatgaaatcagcttac
atcgattattcgatgtcggttattgtttcgagagcgcttcctgatgttagagatggatta
aaacccgtacatcgaagagtattgtttggaatgcacgaattaggaattcgctctaatagt
gcttataaaaaatcagcgagaatcgttggagaagtgttaggtaagtatcacccacacgga
gattcatcagtatatgatactatggttcgtatggctcaagaatggagtttacgttactta
atggttgatggacaaggtaactttggttcgattgatggagatagtcctgcagcgatgcgt
tatacggaggctagaatgaagaaaatatcagaagaaatgcttgctgatattgagaaagaa
actgttgattttcagttaaactttgacgactcattagaagagcctaaagttttgccaact
cgtgttcctaacttattaatcaatggtgcttctggtattgctgttggtatggcaacaaat
atgcctccacataacttaacagaagttattgatggaactttagcatatattgacaataat
gatatcgaaatagatgagttaataaatcatgtaaaagctccagattttccaactggtggt
attatctatggttacgaaggtgtaagagaagcttttaaaacgggtcgtggtcgtattgta
atgcgtgctaaagctggttttgaagaatcaaatggtcgtgaggctattattgtaactgaa
attccttaccaagttaacaaagccgatatgattaagaaaacggctgatttagttaacgat
aaaaaaattgaagggatttcaactattcgagatgaatcggatagaaatggtatgcgtatc
gtttatgaattaaagcgagatgctgttccaaatgtggttttaaatactctttataaatat
acgcagttacagtcttctttcagtgttaataacatcgcattagtaaacggacgtccgcaa
ttactaaatttaaaagagttaattcattatttcgttgaacatcgtcatgatgtagtaaca
agaagagctcaatttgatttacgcaaagcagaagaacgtgctcatattttagaaggttta
attattgcttcagataatattgatgaagttattgctttaattcgttcatctaaagatgga
gaagaggcaagaggtaaattgatggagcgctttaaattgtcagaaattcaagcaagagca
attgttgagatgcgtttacgccagttaacaggtcttgaacaagataaactacgagctgaa
tatgatgagataatgaagttaattacgtatttaaaagaattattagcaaacaaagaaatg
cgtatgcaagtaattaaagacgaattagctgaaattagagataagtatggagacggtcgt
cgttctcaaattgaatatgcaggtggcgatgtaagtattgaagatttaattgccgatgaa
tctgtggttatcactatctctcatgcaggttatattaaacgtacttctttatcagaatac
aaaactcaaaatagaggaggagttggacaaaaaagtgcggctacaagagatcaggatttc
ttagagcatttatttgtggcgacaaaccaccaatatttaatgttctttacgcaaaaagga
aaatgtttctggatgcgtgtatttgaaattccagaaggaacaaaagcaagtaaaggaaga
gcaattcaaaatatcatcaatattgaaccagatgataaagtaaaagcattcatttgtaca
caggacttaaaagatgaggaatatgtaaataatcatttcgtgattatggctactaagcaa
ggtcaagttaaaaagactccgcttgaacaatattcacgtccgcgacaaaatggtattaat
gcaattactatcaaagaagatgacgaattattagaagcaaaattaactactggaaacagt
caagttttattagcagttaaatctggtaaattagttcgtttcgaagaagagaaaacacgt
ccgatgggaagaacagcttcaggagttcgtggaattactttagctgatgaaaaagatgaa
gtaattggaatgatttctattgatagagataaagttaacgaatctcaaattttagtagtt
actgaaaatggttatggtaaacgtactttattagttgatgaagatggcgaagatgtatac
cgtataacaaaccgtggaggtaaaggtgttaaaactttaaatattaccgaaaaaacaggt
caattaatcgcaattaatgcggtaacagatgatgatgatttaatgattatcaacaaatct
ggattaaccattagaatgcgtgttgatgatttacgtgtaatgggtagagctacgcaagga
gtacgtttaattaacatcaaagggactgactcaattgctgctgttaccaaagttttacgt
gaagatgaatctgaggaaatattagaaggagaggaaaacactccagagattgattcaact
gaaaataacgaaactcaagaataa
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