Flavobacterium okayamense: KK2020170_21620
Help
Entry
KK2020170_21620 CDS
T09418
Symbol
fadD
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fok
Flavobacterium okayamense
Pathway
fok00061
Fatty acid biosynthesis
fok00071
Fatty acid degradation
fok01100
Metabolic pathways
fok01212
Fatty acid metabolism
fok02024
Quorum sensing
fok04146
Peroxisome
Module
fok_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fok00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KK2020170_21620 (fadD)
00071 Fatty acid degradation
KK2020170_21620 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KK2020170_21620 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KK2020170_21620 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fok01004
]
KK2020170_21620 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fok04147
]
KK2020170_21620 (fadD)
Enzymes [BR:
fok01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KK2020170_21620 (fadD)
Lipid biosynthesis proteins [BR:
fok01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KK2020170_21620 (fadD)
Exosome [BR:
fok04147
]
Exosomal proteins
Exosomal proteins of breast milk
KK2020170_21620 (fadD)
Exosomal proteins of breast cancer cells
KK2020170_21620 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
ZNF380_CC
Motif
Other DBs
NCBI-ProteinID:
BCY29294
UniProt:
A0ABM7S762
LinkDB
All DBs
Position
2364785..2366557
Genome browser
AA seq
590 aa
AA seq
DB search
MNNITRLFDFPYYQLEKYNLKDALVTKIGNEWVKTSTQEYIDKANAISRGLLRLGVQKNN
KIAIISSNNRTEWHICDIGILQTGAQTVPIYPTISEDDYEYILNHSESTYCIVSDQEVYD
KINAIKSKVGSLKEVYSFEKINGCKNWSELLELGSDTSNQNEVETIKESIVTTDLATIIY
TSGTTGRPKGVMLTHQNIVSDVLMSAPRVPLRAGDTRALSFLPICHIFERMLTYLYQYYG
ISIYFAESIEKISDNLKEVHPHVMSVVPRLLEKVYDKIYAKGTDLTGIKKKLFFWALDLG
MDYKPYKENGAWYEFKLKIARKLIFSKWQEGLGGELELLVCGSAALQARLAKVFCAANIP
VMEGYGLTETSPVISVNDMRNNGFRVGTVGKVLDGVEVKIAEDGEILCKGPNVMIGYYKD
EEKTNEALQNGYFHTGDIGEIDNDGFLKITDRKKEMFKTSGGKYVAPQVLENAFKQSRFI
EQIMVIGEGQKMPAAFIQPSFEFINEWAQRKGIELGKSNAEIISNERIIKRIQREVEEIN
ERFGNWEKVKRFELTPDLWSVEGGHLTPTMKLKRKIILEKYKDLYDKIYN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattactcgtttatttgattttccatattatcagttagaaaagtataatctt
aaagatgctttagttacaaaaattggaaatgaatgggttaaaacatcaactcaagaatat
atcgataaagcaaatgctatttcaagaggtttattgagacttggtgttcaaaaaaacaat
aaaattgctattatctcatcaaataatagaactgaatggcatatttgtgacattggtatt
cttcaaactggagcacagactgttccaatctatccaactatttctgaagacgattacgaa
tatatattaaatcattccgaatcaacttattgtattgtttctgatcaagaagtttatgat
aaaattaatgcaataaaaagcaaagttggttctttaaaagaagtctattcttttgaaaaa
attaatggttgtaaaaattggtctgaattattagaattaggctcagatacttcaaatcaa
aatgaagttgaaaccataaaagaaagtattgttacaacagatttagcaactattatatac
acttcgggaacaacaggaagaccaaaaggtgtaatgcttacccatcaaaatattgtttct
gatgttttaatgagtgctcctagagttcctttaagagctggtgatacaagagcattgagt
ttcttacctatatgtcacatttttgaaagaatgttgacatatttatatcaatactatgga
atttcaatctactttgctgaaagtattgaaaagatatctgacaacttaaaagaagtacat
cctcatgtaatgtctgtagtgcctcgtttacttgaaaaagtatatgataagatttatgca
aaaggtacagatttaacaggtatcaaaaagaaacttttcttttgggctttagaccttggc
atggattataaaccatataaagaaaatggcgcttggtatgaatttaaattaaaaattgca
agaaagttaatcttctctaagtggcaagaaggcttaggaggtgagctagaattattagtt
tgtggtagtgctgcattacaagcacgtcttgcaaaagtattttgtgccgcaaatattcca
gttatggaaggttatggcttaacggaaacttctccagtaatttctgtaaatgacatgaga
aataatggtttcagagttgggactgttggtaaagtacttgatggagttgaagttaaaatt
gccgaagatggtgaaattctttgtaaaggtccaaatgtaatgattggttactataaagat
gaagaaaaaactaatgaagcactacaaaatggatattttcatactggagatatcggagaa
attgacaacgacggattcttaaaaattaccgatcgtaaaaaagaaatgtttaaaacttcg
ggtggaaaatatgttgcgcctcaagtgcttgaaaatgcttttaaacaatctagatttatt
gagcagattatggttattggagaaggccaaaagatgccagctgcatttattcaaccaagt
tttgaattcattaacgaatgggctcaacgtaaaggtatagaattaggtaaatcaaacgca
gaaatcatcagtaatgaaagaatcattaaacgtattcaaagagaagttgaagaaatcaat
gaacgttttggtaattgggaaaaagtaaaacgtttcgagcttactcctgatttatggtct
gttgaaggtggtcatttaacacctacaatgaaattaaagcgtaaaataattcttgaaaaa
tataaagatttgtacgataaaatatacaattaa
DBGET
integrated database retrieval system
