Flavobacterium okayamense: KK2020170_22570
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Entry
KK2020170_22570 CDS
T09418
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
fok
Flavobacterium okayamense
Pathway
fok00541
Biosynthesis of various nucleotide sugars
fok01100
Metabolic pathways
fok01250
Biosynthesis of nucleotide sugars
Module
fok_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
fok00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KK2020170_22570 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fok01005
]
KK2020170_22570 (kdsA)
Enzymes [BR:
fok01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
KK2020170_22570 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
fok01005
]
Lipid A
KK2020170_22570 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
NeuB
Motif
Other DBs
NCBI-ProteinID:
BCY29389
UniProt:
A0ABN6HY99
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All DBs
Position
2453111..2453929
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AA seq
272 aa
AA seq
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MNLNNIPQIKHTDSGNFFVLAGPCAIEGEEMAMRIAEKLVTITNNLEIPYVFKGSFKKAN
RSRVDSFTGIGDEKALKILNKVSREFGIPTVTDIHTNEDAAMAAEYVDILQIPAFLVRQT
DLVVAAANTGKTVNLKKGQFMSPESMKHAAQKVLDSNNENFMITDRGTMFGYQDMIVDFR
GIPTMREFGTTVLDVTHSLQQPNQMSGVTGGRPDMIETIAKAGIAVGVDGIFIETHFDPA
NAKSDGANMLHLDYFEGLMTKLVAIRKTINQF
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaataatattccacaaataaaacatactgatagtggtaatttctttgtacta
gccggtccatgtgctatagaaggagaagaaatggcaatgcgaattgctgaaaaattagtg
actatcacaaataatttagaaattccttatgtatttaaaggatcttttaaaaaagcaaat
cgttctagagtagacagttttactggtattggagatgaaaaagctttaaaaattttaaat
aaagtttctagagaatttggaatacctactgttacagacattcatactaatgaagatgct
gcaatggctgctgaatatgtggatatattacaaattccagcttttttagttcgtcaaacc
gatttagttgtagcagctgcaaatactggtaaaacagttaatctaaaaaaaggacaattt
atgagtcctgaaagtatgaaacatgcagctcaaaaagtacttgatagtaataacgaaaac
ttcatgattactgatagaggaactatgtttggttatcaagatatgattgtagactttaga
ggaattcctacaatgagagaatttggaactacagttttagatgttactcattccttacaa
caacctaatcaaatgagtggtgttacaggtggtcgtcctgatatgatagaaacaattgcc
aaagctggtattgctgtaggagtggatggaattttcatagaaactcacttcgaccctgca
aatgctaaaagtgatggtgctaacatgctacacttagattattttgaaggactaatgaca
aaattagttgctattcgaaaaaccataaatcaattttaa
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