Flavobacterium okayamense: KK2020170_23550
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Entry
KK2020170_23550 CDS
T09418
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fok
Flavobacterium okayamense
Pathway
fok03030
DNA replication
fok03430
Mismatch repair
fok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KK2020170_23550
03430 Mismatch repair
KK2020170_23550
03440 Homologous recombination
KK2020170_23550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fok03032
]
KK2020170_23550
03400 DNA repair and recombination proteins [BR:
fok03400
]
KK2020170_23550
Enzymes [BR:
fok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KK2020170_23550
DNA replication proteins [BR:
fok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KK2020170_23550
DNA repair and recombination proteins [BR:
fok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KK2020170_23550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
GIY_YIG_2
DEDDh_C
DUF7508
DNA_pol_A_exo1
T5orf172
ANT
Motif
Other DBs
NCBI-ProteinID:
BCY29487
UniProt:
A0ABM7SE76
LinkDB
All DBs
Position
2557693..2559051
Genome browser
AA seq
452 aa
AA seq
DB search
MYAILDIETTGGQYNEEGITEIAIYKFDGHEVVDQFISLVNPEKPIQPFVVKLTGINSAM
LRSAPKFYEVAKRIIEITEGCVIVAHNSSFDYRVIRTEFKRLGYDFKKPTLCTVELAKKL
IPEQKSYSLGKLVRGLGIPIADRHRASGDAMATVKLFKLLLSKDKEKEIVKSFVKTEVKA
GMSPKLLDIVESLPSKTGIYYIHNEKGEVIYIGKSKNIKKRINQHFTGTSSKSKKIQREV
YAVTFEETGSELIALLKESEEIKINKPIYNRAQRRTIFQWALYQEKTEKGYISLKIQKAD
GRKKEITSFSTLQEGKAFLFKITEKYNLCQKVNGLYDTKKSCFQYDIKQCFGACIEKEDP
KTYNERVNQFITDYSFTNNNMVIIDKGRTHDEKSAVLIENGIYKGYCFYDLNYQITNIDI
LRNLIISMQHNRDIKTIIQSYMKKNKVKVVSF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgctattctcgacatagaaacaactggaggccaatacaacgaagaaggtattacc
gaaattgctatttataaattcgatggccatgaagttgtggatcaatttataagtttagtt
aatcccgaaaaacctatccaaccttttgttgtaaaattaacgggtattaatagtgctatg
ttacgtagtgctccaaaattttatgaagttgccaaaagaatcatagaaattacagaaggt
tgtgttattgtagctcataattcatcttttgattatcgagtaatccgtacagaattcaaa
cgtttaggctacgattttaaaaaaccaacactttgtactgttgaattagctaaaaaatta
attccagaacaaaaatcgtatagcttaggaaaattggttcgtggattaggaattccaatt
gctgatagacatagagcaagtggtgatgctatggctaccgtaaagctttttaaacttctt
ttatcgaaagataaagagaaagaaatagtaaaaagttttgtaaaaacggaagttaaagct
ggaatgtcgccaaaacttttagacattgttgaaagtttaccatccaaaacgggaatttat
tacattcacaatgaaaagggtgaagttatctatataggtaaaagtaaaaacataaagaaa
cgtataaatcaacattttactggaacttctagtaaaagtaagaagattcagcgtgaagtt
tatgcagtaacttttgaagaaactggaagtgaattaattgctttacttaaagaaagtgaa
gaaataaaaattaacaaacccatttataatcgtgcacaaaggcgaaccatttttcaatgg
gctttgtatcaagagaagacagaaaaaggatatatttctttaaaaattcaaaaagctgac
ggaagaaaaaaagaaataacttcctttagcactttacaagaaggaaaagcatttttgttt
aaaattactgagaaatacaatctttgccaaaaagtaaacggattgtatgatactaaaaaa
agttgctttcagtacgatataaaacaatgctttggtgcttgtattgaaaaagaagacccg
aaaacatacaatgaaagagtaaaccaatttatcaccgattattcgtttacaaacaataat
atggttattattgataaaggaagaactcacgatgaaaaaagtgctgttttaattgaaaat
ggtatatacaaaggctattgcttttatgatttaaattaccaaataacaaatatcgatata
cttcgaaatttaatcatctctatgcagcacaatagagatattaaaaccattattcaaagc
tacatgaagaaaaacaaagtaaaggttgtttcattttaa
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