Francisella opportunistica: CGC45_01210
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Entry
CGC45_01210 CDS
T06355
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
foo
Francisella opportunistica
Pathway
foo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
foo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGC45_01210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foo03021
]
CGC45_01210
03400 DNA repair and recombination proteins [BR:
foo03400
]
CGC45_01210
Enzymes [BR:
foo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGC45_01210
Transcription machinery [BR:
foo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGC45_01210
DNA repair and recombination proteins [BR:
foo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGC45_01210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
POLH-Rev1_HhH
DUF4094
RAD51D_N
Pectinesterase
DUF3198
Motif
Other DBs
NCBI-ProteinID:
AXH32604
LinkDB
All DBs
Position
240984..241955
Genome browser
AA seq
323 aa
AA seq
DB search
MSNNNSKQEFVPNIQLKEELEAFSYKVQLSPVEKGMAHILGNSIRRVLLSSLSGASIIKV
NIANVLHEYSTLEDVKEDVVEIVSNLKKVAIKLDKGIDRLDLELSVNKSGIVTAGDFKTT
QGVEIINKDQPIATLTSTRAFSLTATVSLGRNVGILSAMPTELERVGDIAVDADFNPIKR
VAFEVFDNGDSETLAVFVKTNGTIEPLAAVTKALEYFCEQISVFVSLRVPSNGKIGDVLT
NSNIGPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYTETQLMKIPNLGKKSLHEIKQ
ILIDNNLSLGVQIDNFRELVEGK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaataataattcaaagcaggaatttgtacctaatatacaacttaaagaagagtta
gaagcttttagctataaagttcaactctctcctgtagaaaaaggtatggctcatatcctt
ggtaactctattagaagggttttattatcttcgctatcaggtgcatctataattaaagta
aacatcgctaatgtattacatgagtactctactttagaagatgtcaaagaagacgttgtt
gaaattgtttctaatttgaaaaaggttgcgataaagcttgacaaaggtatagatagactt
gatctagaactatctgtaaataagtcaggtattgttaccgctggagactttaagacaact
cagggtgtagaaataataaataaagatcagccaatagctactttgacaagcacaagagca
tttagcttaactgctactgtaagcttaggtagaaatgtaggaatattatctgcaatgcca
acagagcttgagagagttggtgacatagctgtagatgctgattttaatcctattaagaga
gttgcttttgaggtttttgataatggtgatagtgaaactctagcagtatttgtaaagaca
aatggtactatagaaccactagcggctgttacaaaagctttagagtatttctgtgagcaa
atatcagtatttgtatctcttagagtacctagtaatggtaaaataggggatgtattaacc
aattctaatattggtcctattcttcttaagccaattgatgatttagagttgactgtgaga
tcatctaactgcctacgtgcagagaatatcaagtatcttggtgatttagtacagtataca
gaaacacagcttatgaagatacctaacttaggtaagaagtctctccatgagatcaaacaa
attttaatagataataacttatctctaggcgtccaaattgacaattttagggaactagtt
gaaggaaaataa
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