Francisella opportunistica: CGC45_02180
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Entry
CGC45_02180 CDS
T06355
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
foo
Francisella opportunistica
Pathway
foo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
foo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGC45_02180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foo03400
]
CGC45_02180
Enzymes [BR:
foo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CGC45_02180
DNA repair and recombination proteins [BR:
foo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGC45_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
SAT
Motif
Other DBs
NCBI-ProteinID:
AXH32769
UniProt:
A0A345JQ77
LinkDB
All DBs
Position
446062..449751
Genome browser
AA seq
1229 aa
AA seq
DB search
MKNLDAKTIPLQGRHIIEASAGTGKTYNITELYIRLLLEKKLLPSQILVMTFTKDATQEI
IGRVEAKIRAVIDDVAKAKEVKVWINKQETLIKKGDDNYKHLKRALLEIDEAAIFTIHGF
CKKVLSEQAFASGIEMDVTMEVDTSDILHKVVEDFFRKNINKNQTKFEYLKAYNLHTPGK
FLDRDGLLNVIRSNCEILADSFEQEVNKLIKEKKQVFGNLVKNKAFIFDALVTAKDKKQP
SIKKEQVRTQEWEFIESWANDNKFSLMPKEISAFIHGNRYRGRSDIAEIFEEIKALKDKY
SDIKNLEEYKKQFEAAQFIQQACLQIRQEFAKAKEQKSILDFNDLITKLCQSVKNSSDLV
KTLQAQYPVALIDEFQDTDAEQYQILDTIYPKDKNDLLFLMIGDPKQAIYGFRGGDIFTY
LKAKDSCPVVNQWSMDTNWRSTNEMIKAYNRLFYTQDYQEDGVIGKDIFIAGIDYQTVKA
SPNTNSKNKDFDDNLKPINYFYYQVAVDDNKSDIDKKLSVWTTNEIDRLLNSKKVAENDI
AILVENSTQAKIIQQALRQKNLSSVYLSQRDNVYHSQEAQEILAVMEGINDLENKYLLKR
ALSTSLLGGTADKMLKYHAEDDLSVWDEEIEKAKKLRSKWHKYGFMAFIMQIVHESFSQR
NESKERTITNILHLAVLIKVAENKYKHSNQLIKWYRQQLKNTASSEAELRLESDDNLIKI
ITIHGSKGLEYSVVFIPFASYVSSSKLKLYKINKYYNNQLKQTVYKIGGNDGELKKTVEK
ETIEELMRLFYVAVTRAEHRCYIGVAKYNNGEKSPLAQFLGYQEGEDWLERIQKITDNID
NQSLLINVEDNQNINFKRTPSTSTSFSNHGVEVSNNEALKPNHIGNLKNDNWEMLSFSKI
SQAKAQNPALEKENDESEDDKNQDLDKKLEFRFTASKGADIGNILHNVLEHTDFSNGQID
DTLLQEQIARYKVVAAEDFSNLKVWLEECLVAPILPISVIPSGLTTESFKYSSNCQNSEI
LKRVQDDNIIYNNKLSNSFSLKDIPNSKTLKEAEFYFPVTNEKLYKMHIIKILEEYRKTT
QVISDSDRESFNLFEKNTRLREYDDAILNHKIFGMLHGFIDLIFEYNDKFYIADYKSNYL
GNKLEDYNQQAMQEKNQSSLYDLQYLIYSVALDKYLKQNIPNYDFEKHFGGVYYFYLRGM
KDGFGVYQARPPLEIINMLAKLFNGGDNV
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctagatgcaaaaacaatacctttacaaggtcgccatatcattgaggcaagt
gctggtacgggtaagacttataatatcaccgagctatatatccgattgttgctagagaag
aaattattacctagccaaattcttgtgatgacatttactaaggatgctacacaagagatt
atcggtagagttgaagctaagattagagcagttattgatgatgtagctaaagcaaaagag
gtcaaagtttggataaataaacaagaaactttaattaaaaaaggcgatgacaactacaag
catctaaaaagagcattacttgagatagatgaggcagctattttcacaattcatggtttt
tgtaaaaaggttttaagtgagcaggcttttgctagtggtatcgagatggatgtcactatg
gaggttgatacttctgatattttgcacaaggttgtcgaagatttctttagaaaaaacatt
aataaaaaccagactaaatttgagtatctaaaagcctataatttacatacaccaggcaaa
tttttagatagagatggtttgcttaatgttattagatctaattgtgagattttagcagat
agctttgagcaggaagttaacaaattaataaaagagaaaaaacaagtttttggtaatttg
gtaaaaaacaaagcttttatatttgatgctttagtaacagcaaaagataaaaagcaacca
tctattaaaaaagagcaagttagaactcaagagtgggaatttattgaaagttgggctaat
gataataaatttagtttgatgcctaaagagatttctgcatttatacatggtaatcgttat
cgtggaagaagtgatattgccgaaatctttgaggaaattaaagctttaaaagataaatat
tcagatataaaaaatttagaagaatataaaaaacagtttgaagcagcacaatttatccaa
caagcctgcttacaaatccgtcaagaatttgctaaagccaaagagcaaaagagtatttta
gattttaatgacttaattactaaactttgtcaaagtgttaaaaattcgtctgatttagtc
aaaactctacaagcacaatatccagttgctcttatagatgagtttcaagatactgatgct
gaacaatatcaaatattagatactatctatcccaaagataaaaatgatttattatttctt
atgataggtgatccaaagcaggcaatttatggatttagaggtggcgatattttcacatat
ttaaaagctaaagatagttgcccagtagttaaccaatggagtatggatactaattggcgc
tctaccaacgaaatgataaaggcttataatcgccttttctatactcaagattaccaagaa
gacggagttatcggtaaagatatttttattgcaggtattgactatcaaactgtcaaagca
tctccaaatactaatagtaaaaataaagattttgatgataatcttaagcctattaactac
ttttattatcaagtagcagttgatgataataaaagtgatattgataaaaaattatcagta
tggacaacaaatgaaattgataggttactaaactctaaaaaagtagctgaaaatgatatt
gcaatacttgtagagaatagtacccaagcaaaaattattcaacaagctttacgccagaaa
aatcttagttcagtctatctaagccaaagagataatgtctaccatagtcaagaggcacaa
gagatattagctgtaatggagggtatcaatgatcttgaaaataaatatttactcaaaaga
gcattatctactagtctgctaggcggtactgctgacaaaatgcttaaatatcacgccgaa
gatgatctatcagtatgggatgaggagatagagaaggctaaaaaattacgcagcaaatgg
cataagtatggttttatggcgtttataatgcaaatagttcatgagagttttagccaaaga
aatgaaagcaaagaaagaactataactaatatcctgcatcttgctgtgcttataaaagtt
gctgaaaataaatataaacattcaaatcagctaattaaatggtatcgtcaacaactcaaa
aatactgctagtagtgaagctgaattaagattagaaagtgatgataatttgataaaaata
atcacaattcacggctcgaaaggtcttgaatattctgttgtatttataccgtttgcaagt
tatgtaagttcttcaaagcttaaattatataaaattaataaatattataataatcaacta
aaacaaactgtttacaaaattggcggtaatgatggtgagttaaaaaaaacagttgaaaaa
gaaactattgaagagctaatgagattattttatgtcgcagttacgcgcgcagaacatcgc
tgctatattggagtagcaaaatataataatggtgaaaagtcaccattagcacaattttta
ggttatcaagagggtgaagactggctagaaagaattcaaaaaatcacagataatatagat
aatcaaagtttgcttataaatgttgaagataatcaaaatattaattttaaaaggacgccg
agtacttcgacttcattcagcaaccacggagtcgaagtgtcaaataatgaagctttaaaa
ccaaatcatataggtaacttaaaaaatgataactgggaaatgttatctttctctaaaata
tcgcaagcaaaagctcaaaacccagctttagagaaagaaaatgatgagtcagaggatgat
aaaaatcaagatctagacaaaaaattagaatttagatttacagcttctaaaggagctgac
attggtaatattctccataatgttttagagcatacggattttagtaatggccaaattgat
gatactcttttacaagagcaaatcgctagatataaggttgttgctgcagaagattttagt
aatttaaaagtatggttagaagaatgtttagtagctccaattttacctataagcgtcatt
ccgtcaggcttgaccacggaatcttttaaatatagcagcaattgtcaaaatagtgagatc
ctgaaacgagttcaggatgacaatattatttataataataaattgagtaatagttttagc
ctaaaagatattccaaattcaaaaaccttaaaagaagcagaattttacttccccgtgaca
aatgaaaaactttataaaatgcatatcattaaaattctagaggaatatcgcaaaaccact
caagtcatttccgactctgatcgggaatcttttaacttatttgaaaaaaatacccgccta
cgcgagtatgacgatgctatactaaatcataaaatctttggtatgttacatggttttata
gacttaatttttgagtataatgataagttttatatcgcagattataagtcaaactatctt
ggtaataaattagaagactataatcaacaagctatgcaagagaaaaatcaaagtagtttg
tatgatttgcaatacttgatatatagtgttgccctagataaatatcttaagcagaatata
ccaaactatgactttgagaaacattttggcggagtatattatttttatcttcgtggtatg
aaagacggctttggagtctatcaagcaaggccacctttagaaattataaatatgttagct
aaattgtttaatggaggtgataatgtataa
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