Francisella opportunistica: CGC45_05575
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Entry
CGC45_05575 CDS
T06355
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
foo
Francisella opportunistica
Brite
KEGG Orthology (KO) [BR:
foo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foo03021
]
CGC45_05575 (rpoH)
Transcription machinery [BR:
foo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CGC45_05575 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_25
Sigma70_r1_2
SpoIIID
DUF7383
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
AXH33377
UniProt:
A0A345JRZ1
LinkDB
All DBs
Position
complement(1132861..1133739)
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AA seq
292 aa
AA seq
DB search
MANKKLLPATKTKTLPVVSDNNLSTYLNFVNTLPVLSLEQEQNLAKRYKYKKDLDAAQQL
VLSHLRFVTKIARNFSGYGLSIADLIQEGNIGLMKAVSKFDPDQGVRLVSFAVHWIKAEM
HDYVLKNWKIVKVATTKAQRKLFFNLRSSKGKVGWLSSEDIKQLAEELSVKEETVIEMEK
RMCQGDASLDLPYTDDDGEQTSQQSLYLEDKSSNIEHQIVQQDYYDNLKAVVKGVLSSFD
IRTKDIIMSRYLLEEKATLQDLAAKYNISAERIRQIEEDALAKLKKAIKNRS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaaaaattattaccagctacgaaaacgaaaactctaccggttgtatctgat
aataatctcagtacgtatttaaactttgttaataccttaccggtattatcacttgagcaa
gagcaaaatttagcaaaacgctataaatacaaaaaagatttagatgctgcacagcaactt
gtattatcacatttacgctttgtcactaaaatagcgagaaacttttcaggctatggactt
tcgatagctgatcttattcaagagggtaatattggtcttatgaaagctgtaagtaaattt
gatcctgatcaaggtgtcagattagtatcatttgcagttcactggatcaaggcggagatg
catgattatgtccttaaaaactggaaaattgtcaaagttgctactacaaaagcacagcgt
aaattattttttaatcttagaagtagcaaaggtaaagttggttggttaagctcggaggat
atcaaacagttagccgaagagttaagtgtcaaagaagagactgtcatcgagatggaaaaa
agaatgtgtcagggcgatgcaagtcttgatttaccatatacagatgatgatggtgagcaa
acttcgcagcaaagtttatatttagaagataaatcttcaaacattgagcaccaaattgtc
cagcaagattattatgataacctcaaagcggttgtcaaaggtgttttgagcagttttgat
atacgcacaaaggatattatcatgtcacgttatctacttgaagagaaagcaactctccaa
gatttagccgctaaatataatatctcagctgaaagaatacgccagattgaagaggatgct
ctagctaagcttaaaaaagctatcaagaaccgctcttaa
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